Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 NFYC-AS1-201ENST00000606277 1687 ntBASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 AL645929.1-201ENST00000420084 975 ntBASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 AP002383.4-201ENST00000442518 975 ntBASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 NEK4P2-201ENST00000580004 1012 ntBASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 NPAP1P7-201ENST00000613027 823 ntBASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 AC112497.1-201ENST00000624824 639 ntBASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 AL031432.5-201ENST00000641059 760 ntBASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 AL391807.1-203ENST00000604392 2365 ntBASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 AC016734.2-201ENST00000624325 1377 ntBASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
KRTAP4-3Q9BYR4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms