Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NDUFAF3Q9BU61 KRT17P1-201ENST00000399211 1546 ntBASIC14.4□□□□□ -0.1
NDUFAF3Q9BU61 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.4□□□□□ -0.1
NDUFAF3Q9BU61 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.4□□□□□ -0.1
NDUFAF3Q9BU61 KRT16P6-202ENST00000425692 1426 ntBASIC14.4□□□□□ -0.1
NDUFAF3Q9BU61 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NDUFAF3Q9BU61 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NDUFAF3Q9BU61 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC14.4□□□□□ -0.1
NDUFAF3Q9BU61 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NDUFAF3Q9BU61 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NDUFAF3Q9BU61 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
NDUFAF3Q9BU61 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 ESRRAP1-201ENST00000400596 1257 ntBASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 AC126763.1-201ENST00000552015 2118 ntBASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFAF3Q9BU61 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 HLA-G-202ENST00000376815 851 ntBASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 HLA-G-203ENST00000376818 1127 ntBASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 AC105020.6-201ENST00000621523 1217 ntBASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms