Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 HTR7P1-202ENST00000624664 4411 ntBASIC21.67■■□□□ 1.06
SDF4Q9BRK5 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.67■■□□□ 1.06
SDF4Q9BRK5 TSPY14P-201ENST00000303979 915 ntBASIC21.67■■□□□ 1.06
SDF4Q9BRK5 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SDF4Q9BRK5 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.67■■□□□ 1.06
SDF4Q9BRK5 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.67■■□□□ 1.06
SDF4Q9BRK5 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.67■■□□□ 1.06
SDF4Q9BRK5 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.67■■□□□ 1.06
SDF4Q9BRK5 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SDF4Q9BRK5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SDF4Q9BRK5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SDF4Q9BRK5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SDF4Q9BRK5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SDF4Q9BRK5 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 AC093525.10-201ENST00000625130 1569 ntBASIC21.66■■□□□ 1.06
SDF4Q9BRK5 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 AC128688.1-201ENST00000487626 519 ntBASIC21.66■■□□□ 1.06
SDF4Q9BRK5 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 FEM1AP3-201ENST00000403722 1741 ntBASIC21.66■■□□□ 1.06
SDF4Q9BRK5 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SDF4Q9BRK5 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
SDF4Q9BRK5 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SDF4Q9BRK5 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.65■■□□□ 1.06
SDF4Q9BRK5 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SDF4Q9BRK5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SDF4Q9BRK5 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.65■■□□□ 1.06
SDF4Q9BRK5 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SDF4Q9BRK5 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SDF4Q9BRK5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.65■■□□□ 1.06
SDF4Q9BRK5 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SDF4Q9BRK5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SDF4Q9BRK5 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SDF4Q9BRK5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SDF4Q9BRK5 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.65■■□□□ 1.06
SDF4Q9BRK5 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SDF4Q9BRK5 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SDF4Q9BRK5 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.65■■□□□ 1.06
SDF4Q9BRK5 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.65■■□□□ 1.06
SDF4Q9BRK5 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
SDF4Q9BRK5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.65■■□□□ 1.06
SDF4Q9BRK5 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.65■■□□□ 1.06
SDF4Q9BRK5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SDF4Q9BRK5 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.65■■□□□ 1.06
SDF4Q9BRK5 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SDF4Q9BRK5 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SDF4Q9BRK5 AL512353.2-201ENST00000448759 1962 ntBASIC21.65■■□□□ 1.06
SDF4Q9BRK5 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SDF4Q9BRK5 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SDF4Q9BRK5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SDF4Q9BRK5 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SDF4Q9BRK5 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SDF4Q9BRK5 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SDF4Q9BRK5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
SDF4Q9BRK5 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
SDF4Q9BRK5 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SDF4Q9BRK5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.05
SDF4Q9BRK5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.64■■□□□ 1.05
SDF4Q9BRK5 RCN1P1-201ENST00000400413 996 ntBASIC21.64■■□□□ 1.05
SDF4Q9BRK5 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.64■■□□□ 1.05
SDF4Q9BRK5 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.64■■□□□ 1.05
SDF4Q9BRK5 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.64■■□□□ 1.05
SDF4Q9BRK5 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.64■■□□□ 1.05
SDF4Q9BRK5 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SDF4Q9BRK5 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SDF4Q9BRK5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SDF4Q9BRK5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SDF4Q9BRK5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SDF4Q9BRK5 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SDF4Q9BRK5 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
SDF4Q9BRK5 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SDF4Q9BRK5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SDF4Q9BRK5 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SDF4Q9BRK5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
SDF4Q9BRK5 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms