Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHCHD1Q96BP2 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHCHD1Q96BP2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CHCHD1Q96BP2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 PP12613-201ENST00000424958 2230 ntBASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 NFIC-211ENST00000641145 8399 ntBASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHCHD1Q96BP2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CHCHD1Q96BP2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CHCHD1Q96BP2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC13.58□□□□□ -0.23
CHCHD1Q96BP2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.58□□□□□ -0.23
CHCHD1Q96BP2 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CHCHD1Q96BP2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CHCHD1Q96BP2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CHCHD1Q96BP2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CHCHD1Q96BP2 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
CHCHD1Q96BP2 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.58□□□□□ -0.23
CHCHD1Q96BP2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 TPRG1LP1-201ENST00000598702 760 ntBASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 POR-209ENST00000439269 1858 ntTSL 2 BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 REXO1L9P-201ENST00000604264 2108 ntBASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 MST1L-201ENST00000442552 2185 ntBASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHCHD1Q96BP2 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
CHCHD1Q96BP2 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHCHD1Q96BP2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHCHD1Q96BP2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHCHD1Q96BP2 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHCHD1Q96BP2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHCHD1Q96BP2 LINC00602-201ENST00000629776 2065 ntBASIC13.57□□□□□ -0.24
CHCHD1Q96BP2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHCHD1Q96BP2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHCHD1Q96BP2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHCHD1Q96BP2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms