Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
ZNF428Q96B54 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
ZNF428Q96B54 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ZNF428Q96B54 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ZNF428Q96B54 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ZNF428Q96B54 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC23.95■■□□□ 1.42
ZNF428Q96B54 SNX5-210ENST00000481323 562 ntTSL 3 BASIC23.95■■□□□ 1.42
ZNF428Q96B54 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC23.95■■□□□ 1.42
ZNF428Q96B54 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC23.95■■□□□ 1.42
ZNF428Q96B54 NEK4P2-201ENST00000580004 1012 ntBASIC23.95■■□□□ 1.42
ZNF428Q96B54 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
ZNF428Q96B54 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
ZNF428Q96B54 AC073592.3-201ENST00000625118 1834 ntBASIC23.95■■□□□ 1.42
ZNF428Q96B54 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
ZNF428Q96B54 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC23.94■■□□□ 1.42
ZNF428Q96B54 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC23.94■■□□□ 1.42
ZNF428Q96B54 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
ZNF428Q96B54 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ZNF428Q96B54 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC23.94■■□□□ 1.42
ZNF428Q96B54 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC23.94■■□□□ 1.42
ZNF428Q96B54 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ZNF428Q96B54 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC23.94■■□□□ 1.42
ZNF428Q96B54 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ZNF428Q96B54 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ZNF428Q96B54 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ZNF428Q96B54 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ZNF428Q96B54 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC23.93■■□□□ 1.42
ZNF428Q96B54 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC23.93■■□□□ 1.42
ZNF428Q96B54 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
ZNF428Q96B54 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
ZNF428Q96B54 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
ZNF428Q96B54 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ZNF428Q96B54 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC23.93■■□□□ 1.42
ZNF428Q96B54 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC23.93■■□□□ 1.42
ZNF428Q96B54 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC23.93■■□□□ 1.42
ZNF428Q96B54 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ZNF428Q96B54 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC23.93■■□□□ 1.42
ZNF428Q96B54 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ZNF428Q96B54 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ZNF428Q96B54 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ZNF428Q96B54 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ZNF428Q96B54 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZNF428Q96B54 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC23.92■■□□□ 1.42
ZNF428Q96B54 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZNF428Q96B54 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
ZNF428Q96B54 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZNF428Q96B54 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC23.92■■□□□ 1.42
ZNF428Q96B54 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC23.92■■□□□ 1.42
ZNF428Q96B54 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZNF428Q96B54 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ZNF428Q96B54 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC23.92■■□□□ 1.42
ZNF428Q96B54 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZNF428Q96B54 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZNF428Q96B54 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
ZNF428Q96B54 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZNF428Q96B54 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZNF428Q96B54 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZNF428Q96B54 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZNF428Q96B54 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZNF428Q96B54 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC23.92■■□□□ 1.42
ZNF428Q96B54 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC23.92■■□□□ 1.42
ZNF428Q96B54 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC23.92■■□□□ 1.42
ZNF428Q96B54 MIR3180-4-201ENST00000582223 153 ntBASIC23.92■■□□□ 1.42
ZNF428Q96B54 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ZNF428Q96B54 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ZNF428Q96B54 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC23.92■■□□□ 1.42
ZNF428Q96B54 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZNF428Q96B54 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
ZNF428Q96B54 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZNF428Q96B54 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZNF428Q96B54 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC23.92■■□□□ 1.42
ZNF428Q96B54 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ZNF428Q96B54 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ZNF428Q96B54 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC23.92■■□□□ 1.42
ZNF428Q96B54 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ZNF428Q96B54 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC23.91■■□□□ 1.42
ZNF428Q96B54 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ZNF428Q96B54 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
ZNF428Q96B54 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ZNF428Q96B54 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC23.91■■□□□ 1.42
ZNF428Q96B54 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC23.91■■□□□ 1.42
ZNF428Q96B54 FAM86EP-206ENST00000510506 987 ntBASIC23.91■■□□□ 1.42
ZNF428Q96B54 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC23.91■■□□□ 1.42
ZNF428Q96B54 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC23.91■■□□□ 1.42
ZNF428Q96B54 AC093458.2-201ENST00000623150 629 ntBASIC23.91■■□□□ 1.42
ZNF428Q96B54 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ZNF428Q96B54 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ZNF428Q96B54 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ZNF428Q96B54 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ZNF428Q96B54 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ZNF428Q96B54 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC23.91■■□□□ 1.42
ZNF428Q96B54 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ZNF428Q96B54 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC23.91■■□□□ 1.42
ZNF428Q96B54 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC23.9■■□□□ 1.42
ZNF428Q96B54 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC23.9■■□□□ 1.42
ZNF428Q96B54 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC23.9■■□□□ 1.42
ZNF428Q96B54 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ZNF428Q96B54 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
ZNF428Q96B54 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC23.9■■□□□ 1.42
ZNF428Q96B54 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms