Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
USP9XQ93008 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
USP9XQ93008 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
USP9XQ93008 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
USP9XQ93008 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.2■□□□□ 0.18
USP9XQ93008 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.2■□□□□ 0.18
USP9XQ93008 AL645939.2-201ENST00000427340 991 ntBASIC16.2■□□□□ 0.18
USP9XQ93008 AC007967.2-201ENST00000432613 625 ntBASIC16.2■□□□□ 0.18
USP9XQ93008 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.2■□□□□ 0.18
USP9XQ93008 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
USP9XQ93008 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
USP9XQ93008 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.2■□□□□ 0.18
USP9XQ93008 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.2■□□□□ 0.18
USP9XQ93008 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.2■□□□□ 0.18
USP9XQ93008 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.2■□□□□ 0.18
USP9XQ93008 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.2■□□□□ 0.18
USP9XQ93008 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.2■□□□□ 0.18
USP9XQ93008 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
USP9XQ93008 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.2■□□□□ 0.18
USP9XQ93008 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
USP9XQ93008 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
USP9XQ93008 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
USP9XQ93008 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.2■□□□□ 0.18
USP9XQ93008 AC190387.1-201ENST00000551683 408 ntBASIC16.2■□□□□ 0.18
USP9XQ93008 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.2■□□□□ 0.18
USP9XQ93008 AC106028.4-201ENST00000614509 607 ntBASIC16.2■□□□□ 0.18
USP9XQ93008 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.2■□□□□ 0.18
USP9XQ93008 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.2■□□□□ 0.18
USP9XQ93008 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
USP9XQ93008 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.2■□□□□ 0.18
USP9XQ93008 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.19■□□□□ 0.18
USP9XQ93008 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP9XQ93008 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP9XQ93008 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.19■□□□□ 0.18
USP9XQ93008 UNC93B6-202ENST00000528242 690 ntBASIC16.19■□□□□ 0.18
USP9XQ93008 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
USP9XQ93008 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.19■□□□□ 0.18
USP9XQ93008 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.19■□□□□ 0.18
USP9XQ93008 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.19■□□□□ 0.18
USP9XQ93008 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP9XQ93008 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP9XQ93008 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP9XQ93008 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP9XQ93008 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP9XQ93008 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP9XQ93008 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP9XQ93008 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.19■□□□□ 0.18
USP9XQ93008 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
USP9XQ93008 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.19■□□□□ 0.18
USP9XQ93008 MIR1199-201ENST00000621445 119 ntBASIC16.19■□□□□ 0.18
USP9XQ93008 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP9XQ93008 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.19■□□□□ 0.18
USP9XQ93008 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP9XQ93008 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
USP9XQ93008 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP9XQ93008 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP9XQ93008 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP9XQ93008 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
USP9XQ93008 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.18■□□□□ 0.18
USP9XQ93008 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP9XQ93008 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP9XQ93008 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
USP9XQ93008 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP9XQ93008 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.18■□□□□ 0.18
USP9XQ93008 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.18■□□□□ 0.18
USP9XQ93008 RNA5SP416-201ENST00000516838 111 ntBASIC16.18■□□□□ 0.18
USP9XQ93008 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.18■□□□□ 0.18
USP9XQ93008 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.18■□□□□ 0.18
USP9XQ93008 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.18■□□□□ 0.18
USP9XQ93008 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.18■□□□□ 0.18
USP9XQ93008 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
USP9XQ93008 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
USP9XQ93008 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
USP9XQ93008 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.17■□□□□ 0.18
USP9XQ93008 TP73-AS1-210ENST00000637775 1455 ntBASIC16.17■□□□□ 0.18
USP9XQ93008 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
USP9XQ93008 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP9XQ93008 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
USP9XQ93008 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.17■□□□□ 0.18
USP9XQ93008 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
USP9XQ93008 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP9XQ93008 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP9XQ93008 MIR770-201ENST00000390219 98 ntBASIC16.17■□□□□ 0.18
USP9XQ93008 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP9XQ93008 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
USP9XQ93008 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.17■□□□□ 0.18
USP9XQ93008 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.17■□□□□ 0.18
USP9XQ93008 ALG1L5P-201ENST00000482043 771 ntBASIC16.17■□□□□ 0.18
USP9XQ93008 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.17■□□□□ 0.18
USP9XQ93008 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.17■□□□□ 0.18
USP9XQ93008 DUX4L17-201ENST00000557360 1267 ntBASIC16.17■□□□□ 0.18
USP9XQ93008 AL096865.1-201ENST00000606796 927 ntBASIC16.17■□□□□ 0.18
USP9XQ93008 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.17■□□□□ 0.18
USP9XQ93008 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP9XQ93008 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
USP9XQ93008 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
USP9XQ93008 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.17■□□□□ 0.18
USP9XQ93008 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
USP9XQ93008 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.17■□□□□ 0.18
USP9XQ93008 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms