Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AC012306.2-201ENST00000609350 630 ntBASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH19Q8TAB3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 AC135050.7-201ENST00000624508 2218 ntBASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 BICD1-207ENST00000551848 1962 ntBASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 KRT18P41-201ENST00000518924 1277 ntBASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 AP003041.3-201ENST00000527151 707 ntBASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 KRT8P9-201ENST00000558927 1449 ntBASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 AC092338.2-201ENST00000568827 1415 ntBASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH19Q8TAB3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH19Q8TAB3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH19Q8TAB3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.24■□□□□ 0.67
PCDH19Q8TAB3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDH19Q8TAB3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDH19Q8TAB3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
PCDH19Q8TAB3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDH19Q8TAB3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH19Q8TAB3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH19Q8TAB3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH19Q8TAB3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH19Q8TAB3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH19Q8TAB3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDH19Q8TAB3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDH19Q8TAB3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDH19Q8TAB3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDH19Q8TAB3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDH19Q8TAB3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH19Q8TAB3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDH19Q8TAB3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH19Q8TAB3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
PCDH19Q8TAB3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH19Q8TAB3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH19Q8TAB3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PCDH19Q8TAB3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH19Q8TAB3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH19Q8TAB3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDH19Q8TAB3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 MIR1224-201ENST00000408193 85 ntBASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 TSPY17P-201ENST00000450329 467 ntBASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 MYC-208ENST00000641036 567 ntBASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH19Q8TAB3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH19Q8TAB3 CYP2D8P-201ENST00000433633 1490 ntBASIC19.22■□□□□ 0.67
PCDH19Q8TAB3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH19Q8TAB3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms