Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC01006Q8NI28 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.49□□□□□ -0.09
LINC01006Q8NI28 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.49□□□□□ -0.09
LINC01006Q8NI28 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.49□□□□□ -0.09
LINC01006Q8NI28 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC01006Q8NI28 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01006Q8NI28 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01006Q8NI28 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC01006Q8NI28 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01006Q8NI28 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.48□□□□□ -0.09
LINC01006Q8NI28 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01006Q8NI28 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.48□□□□□ -0.09
LINC01006Q8NI28 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01006Q8NI28 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.48□□□□□ -0.09
LINC01006Q8NI28 IGHV3-47-201ENST00000425060 335 ntBASIC14.48□□□□□ -0.09
LINC01006Q8NI28 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.48□□□□□ -0.09
LINC01006Q8NI28 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC01006Q8NI28 RN7SL606P-201ENST00000472779 293 ntBASIC14.48□□□□□ -0.09
LINC01006Q8NI28 VENTXP7-201ENST00000475503 772 ntBASIC14.48□□□□□ -0.09
LINC01006Q8NI28 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.48□□□□□ -0.09
LINC01006Q8NI28 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01006Q8NI28 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC01006Q8NI28 AL353801.3-201ENST00000609898 542 ntBASIC14.48□□□□□ -0.09
LINC01006Q8NI28 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.48□□□□□ -0.09
LINC01006Q8NI28 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
LINC01006Q8NI28 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
LINC01006Q8NI28 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01006Q8NI28 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01006Q8NI28 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01006Q8NI28 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01006Q8NI28 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
LINC01006Q8NI28 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01006Q8NI28 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01006Q8NI28 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01006Q8NI28 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC14.48□□□□□ -0.09
LINC01006Q8NI28 AL353692.3-201ENST00000407031 1396 ntBASIC14.47□□□□□ -0.09
LINC01006Q8NI28 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 Z98044.1-201ENST00000632503 1764 ntBASIC14.47□□□□□ -0.09
LINC01006Q8NI28 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 KRT89P-201ENST00000620027 1478 ntBASIC14.47□□□□□ -0.09
LINC01006Q8NI28 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 AP002469.2-201ENST00000531724 424 ntBASIC14.47□□□□□ -0.09
LINC01006Q8NI28 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms