Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
RTL9Q8NET4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
RTL9Q8NET4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC22.96■■□□□ 1.27
RTL9Q8NET4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RTL9Q8NET4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RTL9Q8NET4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RTL9Q8NET4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC22.95■■□□□ 1.26
RTL9Q8NET4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RTL9Q8NET4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
RTL9Q8NET4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC22.95■■□□□ 1.26
RTL9Q8NET4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
RTL9Q8NET4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RTL9Q8NET4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
RTL9Q8NET4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC22.95■■□□□ 1.26
RTL9Q8NET4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC22.95■■□□□ 1.26
RTL9Q8NET4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RTL9Q8NET4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RTL9Q8NET4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC22.95■■□□□ 1.26
RTL9Q8NET4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC22.95■■□□□ 1.26
RTL9Q8NET4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RTL9Q8NET4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RTL9Q8NET4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RTL9Q8NET4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RTL9Q8NET4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
RTL9Q8NET4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RTL9Q8NET4 IGHGP-201ENST00000390555 1178 ntBASIC22.94■■□□□ 1.26
RTL9Q8NET4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC22.94■■□□□ 1.26
RTL9Q8NET4 AP003733.1-201ENST00000491725 852 ntBASIC22.94■■□□□ 1.26
RTL9Q8NET4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC22.94■■□□□ 1.26
RTL9Q8NET4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC22.94■■□□□ 1.26
RTL9Q8NET4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
RTL9Q8NET4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC22.94■■□□□ 1.26
RTL9Q8NET4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC22.94■■□□□ 1.26
RTL9Q8NET4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
RTL9Q8NET4 GPR32P1-201ENST00000601788 811 ntBASIC22.94■■□□□ 1.26
RTL9Q8NET4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC22.94■■□□□ 1.26
RTL9Q8NET4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC22.94■■□□□ 1.26
RTL9Q8NET4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RTL9Q8NET4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RTL9Q8NET4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC22.94■■□□□ 1.26
RTL9Q8NET4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RTL9Q8NET4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
RTL9Q8NET4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC22.94■■□□□ 1.26
RTL9Q8NET4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RTL9Q8NET4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC22.94■■□□□ 1.26
RTL9Q8NET4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RTL9Q8NET4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC22.93■■□□□ 1.26
RTL9Q8NET4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
RTL9Q8NET4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
RTL9Q8NET4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RTL9Q8NET4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RTL9Q8NET4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RTL9Q8NET4 KRT17P6-201ENST00000453795 1220 ntBASIC22.93■■□□□ 1.26
RTL9Q8NET4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC22.93■■□□□ 1.26
RTL9Q8NET4 AC005332.3-201ENST00000589904 676 ntBASIC22.93■■□□□ 1.26
RTL9Q8NET4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC22.93■■□□□ 1.26
RTL9Q8NET4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
RTL9Q8NET4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
RTL9Q8NET4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC22.93■■□□□ 1.26
RTL9Q8NET4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC22.93■■□□□ 1.26
RTL9Q8NET4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RTL9Q8NET4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC22.92■■□□□ 1.26
RTL9Q8NET4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RTL9Q8NET4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
RTL9Q8NET4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC22.92■■□□□ 1.26
RTL9Q8NET4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC22.92■■□□□ 1.26
RTL9Q8NET4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RTL9Q8NET4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
RTL9Q8NET4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RTL9Q8NET4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC22.92■■□□□ 1.26
RTL9Q8NET4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.92■■□□□ 1.26
RTL9Q8NET4 AL161938.1-201ENST00000569833 2180 ntBASIC22.92■■□□□ 1.26
RTL9Q8NET4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
RTL9Q8NET4 KRT8P10-201ENST00000450021 1447 ntBASIC22.92■■□□□ 1.26
RTL9Q8NET4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
RTL9Q8NET4 KRT18P1-202ENST00000452408 1331 ntBASIC22.91■■□□□ 1.26
RTL9Q8NET4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RTL9Q8NET4 AC004870.1-201ENST00000315132 882 ntBASIC22.91■■□□□ 1.26
RTL9Q8NET4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RTL9Q8NET4 NUS1P1-201ENST00000446295 882 ntBASIC22.91■■□□□ 1.26
RTL9Q8NET4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC22.91■■□□□ 1.26
RTL9Q8NET4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC22.91■■□□□ 1.26
RTL9Q8NET4 AC024563.2-201ENST00000603282 481 ntBASIC22.91■■□□□ 1.26
RTL9Q8NET4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC22.91■■□□□ 1.26
RTL9Q8NET4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
RTL9Q8NET4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC22.91■■□□□ 1.26
RTL9Q8NET4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
RTL9Q8NET4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RTL9Q8NET4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RTL9Q8NET4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
RTL9Q8NET4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RTL9Q8NET4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RTL9Q8NET4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC22.91■■□□□ 1.26
RTL9Q8NET4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
RTL9Q8NET4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RTL9Q8NET4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC22.91■■□□□ 1.26
RTL9Q8NET4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC22.91■■□□□ 1.26
RTL9Q8NET4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RTL9Q8NET4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RTL9Q8NET4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms