Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 AC004264.1-201ENST00000608354 794 ntBASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 NBPF21P-201ENST00000425093 1451 ntBASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNAAF1Q8NEP3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 TSPY21P-201ENST00000433481 731 ntBASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.41■□□□□ 0.22
DNAAF1Q8NEP3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms