Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01555Q8NAE3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01555Q8NAE3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01555Q8NAE3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01555Q8NAE3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.93■□□□□ 0.46
LINC01555Q8NAE3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.93■□□□□ 0.46
LINC01555Q8NAE3 KRT18P38-201ENST00000449496 1282 ntBASIC17.93■□□□□ 0.46
LINC01555Q8NAE3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
LINC01555Q8NAE3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.93■□□□□ 0.46
LINC01555Q8NAE3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.93■□□□□ 0.46
LINC01555Q8NAE3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.93■□□□□ 0.46
LINC01555Q8NAE3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.93■□□□□ 0.46
LINC01555Q8NAE3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
LINC01555Q8NAE3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01555Q8NAE3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01555Q8NAE3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01555Q8NAE3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01555Q8NAE3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01555Q8NAE3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 FAM8A6P-201ENST00000407496 1135 ntBASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 SPDYE15P-201ENST00000424157 909 ntBASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.92■□□□□ 0.46
LINC01555Q8NAE3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 MIR1224-201ENST00000408193 85 ntBASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 AC010240.3-201ENST00000607688 395 ntBASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 AC010331.1-201ENST00000611423 582 ntBASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01555Q8NAE3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 AC112777.1-201ENST00000540175 1423 ntBASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 AC099343.3-201ENST00000605834 2503 ntBASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 AC005082.1-201ENST00000413042 2259 ntBASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms