Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 RBM17P1-201ENST00000453646 1190 ntBASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE9Q8IYJ1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CPNE9Q8IYJ1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CPNE9Q8IYJ1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 AL357033.4-201ENST00000617703 1807 ntBASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 AC126763.1-201ENST00000552015 2118 ntBASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 AC090164.3-201ENST00000610780 2143 ntBASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 AC018470.1-201ENST00000624790 3129 ntBASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.45■□□□□ 0.54
CPNE9Q8IYJ1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE9Q8IYJ1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE9Q8IYJ1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.44■□□□□ 0.54
CPNE9Q8IYJ1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.44■□□□□ 0.54
CPNE9Q8IYJ1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
CPNE9Q8IYJ1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.44■□□□□ 0.54
CPNE9Q8IYJ1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.44■□□□□ 0.54
CPNE9Q8IYJ1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CPNE9Q8IYJ1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE9Q8IYJ1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE9Q8IYJ1 UNC93B2-201ENST00000285383 730 ntBASIC18.44■□□□□ 0.54
CPNE9Q8IYJ1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.44■□□□□ 0.54
CPNE9Q8IYJ1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.44■□□□□ 0.54
CPNE9Q8IYJ1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE9Q8IYJ1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
CPNE9Q8IYJ1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE9Q8IYJ1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE9Q8IYJ1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.44■□□□□ 0.54
CPNE9Q8IYJ1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.44■□□□□ 0.54
CPNE9Q8IYJ1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE9Q8IYJ1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE9Q8IYJ1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE9Q8IYJ1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE9Q8IYJ1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE9Q8IYJ1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.44■□□□□ 0.54
CPNE9Q8IYJ1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms