Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 HTR7P1-202ENST00000624664 4411 ntBASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 RCC2P3-201ENST00000418112 1537 ntBASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 AL441883.1-201ENST00000566170 1045 ntBASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 AL512353.2-201ENST00000448759 1962 ntBASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM48Q8IWZ4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 AL359075.1-203ENST00000462729 1002 ntBASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 AC020763.4-201ENST00000623414 4170 ntBASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM48Q8IWZ4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM48Q8IWZ4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM48Q8IWZ4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM48Q8IWZ4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM48Q8IWZ4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM48Q8IWZ4 AC026471.1-201ENST00000564629 3026 ntBASIC18.27■□□□□ 0.52
TRIM48Q8IWZ4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM48Q8IWZ4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM48Q8IWZ4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM48Q8IWZ4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM48Q8IWZ4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM48Q8IWZ4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
TRIM48Q8IWZ4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TRIM48Q8IWZ4 FAM8A6P-201ENST00000407496 1135 ntBASIC18.27■□□□□ 0.52
TRIM48Q8IWZ4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.27■□□□□ 0.52
TRIM48Q8IWZ4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.27■□□□□ 0.52
TRIM48Q8IWZ4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.27■□□□□ 0.52
TRIM48Q8IWZ4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.27■□□□□ 0.52
TRIM48Q8IWZ4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM48Q8IWZ4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM48Q8IWZ4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM48Q8IWZ4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM48Q8IWZ4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM48Q8IWZ4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM48Q8IWZ4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM48Q8IWZ4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms