Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 AP000550.4-202ENST00000639755 178 ntBASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 AC006333.2-201ENST00000607957 2099 ntBASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 AC034236.2-201ENST00000606662 1610 ntBASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 HEIH-201ENST00000623091 1652 ntBASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 AC005332.1-201ENST00000577698 1310 ntBASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 IER3-202ENST00000376377 1350 ntBASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
SCN4BQ8IWT1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.64■□□□□ 0.74
SCN4BQ8IWT1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SCN4BQ8IWT1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
SCN4BQ8IWT1 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SCN4BQ8IWT1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.64■□□□□ 0.73
SCN4BQ8IWT1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCN4BQ8IWT1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCN4BQ8IWT1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCN4BQ8IWT1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCN4BQ8IWT1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCN4BQ8IWT1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.64■□□□□ 0.73
SCN4BQ8IWT1 MIR3917-201ENST00000580971 93 ntBASIC19.64■□□□□ 0.73
SCN4BQ8IWT1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.64■□□□□ 0.73
SCN4BQ8IWT1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.64■□□□□ 0.73
SCN4BQ8IWT1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SCN4BQ8IWT1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.64■□□□□ 0.73
SCN4BQ8IWT1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCN4BQ8IWT1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SCN4BQ8IWT1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.64■□□□□ 0.73
SCN4BQ8IWT1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCN4BQ8IWT1 AL357033.4-201ENST00000617703 1807 ntBASIC19.64■□□□□ 0.73
SCN4BQ8IWT1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCN4BQ8IWT1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCN4BQ8IWT1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCN4BQ8IWT1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCN4BQ8IWT1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 KRT8P7-201ENST00000533003 1432 ntBASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 HOXB1-202ENST00000577092 1414 ntBASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 HBZP1-201ENST00000354915 429 ntBASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms