Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CRLF3Q8IUI8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CRLF3Q8IUI8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CRLF3Q8IUI8 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CRLF3Q8IUI8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.64■□□□□ 0.57
CRLF3Q8IUI8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CRLF3Q8IUI8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CRLF3Q8IUI8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CRLF3Q8IUI8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.64■□□□□ 0.57
CRLF3Q8IUI8 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CRLF3Q8IUI8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 AC120498.8-201ENST00000614275 531 ntBASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 FAM197Y4-202ENST00000622692 608 ntBASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CRLF3Q8IUI8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CRLF3Q8IUI8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CRLF3Q8IUI8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CRLF3Q8IUI8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CRLF3Q8IUI8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CRLF3Q8IUI8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.62■□□□□ 0.57
CRLF3Q8IUI8 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CRLF3Q8IUI8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CRLF3Q8IUI8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CRLF3Q8IUI8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.62■□□□□ 0.57
CRLF3Q8IUI8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.62■□□□□ 0.57
CRLF3Q8IUI8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.62■□□□□ 0.57
CRLF3Q8IUI8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.62■□□□□ 0.57
CRLF3Q8IUI8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.62■□□□□ 0.57
CRLF3Q8IUI8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CRLF3Q8IUI8 AL121906.2-201ENST00000621597 723 ntBASIC18.62■□□□□ 0.57
CRLF3Q8IUI8 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CRLF3Q8IUI8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.62■□□□□ 0.57
CRLF3Q8IUI8 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.62■□□□□ 0.57
CRLF3Q8IUI8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.62■□□□□ 0.57
CRLF3Q8IUI8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CRLF3Q8IUI8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CRLF3Q8IUI8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CRLF3Q8IUI8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.62■□□□□ 0.57
CRLF3Q8IUI8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CRLF3Q8IUI8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CRLF3Q8IUI8 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CRLF3Q8IUI8 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CRLF3Q8IUI8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.61■□□□□ 0.57
CRLF3Q8IUI8 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CRLF3Q8IUI8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CRLF3Q8IUI8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CRLF3Q8IUI8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CRLF3Q8IUI8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CRLF3Q8IUI8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CRLF3Q8IUI8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CRLF3Q8IUI8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.61■□□□□ 0.57
CRLF3Q8IUI8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CRLF3Q8IUI8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CRLF3Q8IUI8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CRLF3Q8IUI8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CRLF3Q8IUI8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CRLF3Q8IUI8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CRLF3Q8IUI8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.61■□□□□ 0.57
CRLF3Q8IUI8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.61■□□□□ 0.57
CRLF3Q8IUI8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
CRLF3Q8IUI8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.61■□□□□ 0.57
CRLF3Q8IUI8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CRLF3Q8IUI8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CRLF3Q8IUI8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.61■□□□□ 0.57
CRLF3Q8IUI8 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CRLF3Q8IUI8 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CRLF3Q8IUI8 AC008764.6-201ENST00000595909 2069 ntBASIC18.61■□□□□ 0.57
CRLF3Q8IUI8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.61■□□□□ 0.57
CRLF3Q8IUI8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CRLF3Q8IUI8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms