Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF135Q8IUD6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RNF135Q8IUD6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF135Q8IUD6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF135Q8IUD6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF135Q8IUD6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF135Q8IUD6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF135Q8IUD6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF135Q8IUD6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.74■□□□□ 0.75
RNF135Q8IUD6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF135Q8IUD6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
RNF135Q8IUD6 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF135Q8IUD6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF135Q8IUD6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF135Q8IUD6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF135Q8IUD6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF135Q8IUD6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF135Q8IUD6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF135Q8IUD6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF135Q8IUD6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF135Q8IUD6 AL162741.1-201ENST00000565563 1558 ntBASIC19.74■□□□□ 0.75
RNF135Q8IUD6 HLA-A-201ENST00000376802 1334 ntBASIC19.74■□□□□ 0.75
RNF135Q8IUD6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF135Q8IUD6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF135Q8IUD6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF135Q8IUD6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF135Q8IUD6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF135Q8IUD6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF135Q8IUD6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF135Q8IUD6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RNF135Q8IUD6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF135Q8IUD6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RNF135Q8IUD6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF135Q8IUD6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF135Q8IUD6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF135Q8IUD6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF135Q8IUD6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.73■□□□□ 0.75
RNF135Q8IUD6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF135Q8IUD6 AL590627.1-203ENST00000421194 1026 ntBASIC19.73■□□□□ 0.75
RNF135Q8IUD6 PMS2P1-201ENST00000431037 1228 ntBASIC19.73■□□□□ 0.75
RNF135Q8IUD6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.73■□□□□ 0.75
RNF135Q8IUD6 LINC00265-3P-201ENST00000447588 903 ntBASIC19.73■□□□□ 0.75
RNF135Q8IUD6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.73■□□□□ 0.75
RNF135Q8IUD6 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF135Q8IUD6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.73■□□□□ 0.75
RNF135Q8IUD6 TPSP2-201ENST00000561760 610 ntBASIC19.73■□□□□ 0.75
RNF135Q8IUD6 AL121912.1-201ENST00000603683 238 ntBASIC19.73■□□□□ 0.75
RNF135Q8IUD6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RNF135Q8IUD6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RNF135Q8IUD6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF135Q8IUD6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF135Q8IUD6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF135Q8IUD6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF135Q8IUD6 TREX1-205ENST00000625293 1783 ntBASIC19.72■□□□□ 0.75
RNF135Q8IUD6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RNF135Q8IUD6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF135Q8IUD6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF135Q8IUD6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF135Q8IUD6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
RNF135Q8IUD6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF135Q8IUD6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF135Q8IUD6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF135Q8IUD6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF135Q8IUD6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF135Q8IUD6 KRT8P11-201ENST00000409686 1436 ntBASIC19.72■□□□□ 0.75
RNF135Q8IUD6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF135Q8IUD6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RNF135Q8IUD6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF135Q8IUD6 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF135Q8IUD6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF135Q8IUD6 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.72■□□□□ 0.75
RNF135Q8IUD6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF135Q8IUD6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF135Q8IUD6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF135Q8IUD6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RNF135Q8IUD6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
RNF135Q8IUD6 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF135Q8IUD6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF135Q8IUD6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF135Q8IUD6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF135Q8IUD6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF135Q8IUD6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RNF135Q8IUD6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF135Q8IUD6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RNF135Q8IUD6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF135Q8IUD6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF135Q8IUD6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF135Q8IUD6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RNF135Q8IUD6 AC093525.10-201ENST00000625130 1569 ntBASIC19.71■□□□□ 0.75
RNF135Q8IUD6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF135Q8IUD6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF135Q8IUD6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF135Q8IUD6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF135Q8IUD6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF135Q8IUD6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF135Q8IUD6 DRAXINP1-201ENST00000437611 948 ntBASIC19.71■□□□□ 0.75
RNF135Q8IUD6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF135Q8IUD6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.71■□□□□ 0.75
RNF135Q8IUD6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF135Q8IUD6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms