Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 ESPNP-201ENST00000270691 2015 ntBASIC20.29■□□□□ 0.84
FOXR2Q6PJQ5 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXR2Q6PJQ5 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXR2Q6PJQ5 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXR2Q6PJQ5 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXR2Q6PJQ5 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXR2Q6PJQ5 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXR2Q6PJQ5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXR2Q6PJQ5 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FOXR2Q6PJQ5 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
FOXR2Q6PJQ5 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXR2Q6PJQ5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXR2Q6PJQ5 MIR149-201ENST00000384879 89 ntBASIC20.28■□□□□ 0.84
FOXR2Q6PJQ5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.28■□□□□ 0.84
FOXR2Q6PJQ5 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.28■□□□□ 0.84
FOXR2Q6PJQ5 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.28■□□□□ 0.84
FOXR2Q6PJQ5 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FOXR2Q6PJQ5 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.28■□□□□ 0.84
FOXR2Q6PJQ5 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.28■□□□□ 0.84
FOXR2Q6PJQ5 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.28■□□□□ 0.84
FOXR2Q6PJQ5 CR769767.2-201ENST00000622735 460 ntBASIC20.28■□□□□ 0.84
FOXR2Q6PJQ5 TMEM191A-211ENST00000637163 1067 ntBASIC20.28■□□□□ 0.84
FOXR2Q6PJQ5 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXR2Q6PJQ5 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
FOXR2Q6PJQ5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
FOXR2Q6PJQ5 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.28■□□□□ 0.84
FOXR2Q6PJQ5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.28■□□□□ 0.84
FOXR2Q6PJQ5 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.28■□□□□ 0.84
FOXR2Q6PJQ5 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXR2Q6PJQ5 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 TSPY14P-201ENST00000303979 915 ntBASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 BX088651.1-201ENST00000540551 451 ntBASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 SDHAP2-201ENST00000455183 2001 ntBASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FOXR2Q6PJQ5 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.27■□□□□ 0.83
FOXR2Q6PJQ5 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.27■□□□□ 0.83
FOXR2Q6PJQ5 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
FOXR2Q6PJQ5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 GMCL1P1-201ENST00000463439 1581 ntBASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 AC116562.4-202ENST00000641738 218 ntBASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 KRT17P2-201ENST00000300992 1314 ntBASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.26■□□□□ 0.83
FOXR2Q6PJQ5 AC009102.3-201ENST00000623118 1491 ntBASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms