Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 KRT16P1-201ENST00000399124 1418 ntBASIC19.04■□□□□ 0.64
CASC4Q6P4E1 AC004951.3-201ENST00000418645 1148 ntBASIC19.04■□□□□ 0.64
CASC4Q6P4E1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.04■□□□□ 0.64
CASC4Q6P4E1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 AL353708.3-201ENST00000610272 989 ntBASIC19.04■□□□□ 0.64
CASC4Q6P4E1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
CASC4Q6P4E1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 AC091390.4-202ENST00000476426 537 ntBASIC19.03■□□□□ 0.64
CASC4Q6P4E1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 RPPH1-201ENST00000516869 333 ntBASIC19.03■□□□□ 0.64
CASC4Q6P4E1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 FAM197Y4-202ENST00000622692 608 ntBASIC19.03■□□□□ 0.64
CASC4Q6P4E1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.03■□□□□ 0.64
CASC4Q6P4E1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CASC4Q6P4E1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CASC4Q6P4E1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CASC4Q6P4E1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CASC4Q6P4E1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CASC4Q6P4E1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CASC4Q6P4E1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CASC4Q6P4E1 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.02■□□□□ 0.64
CASC4Q6P4E1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.02■□□□□ 0.64
CASC4Q6P4E1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CASC4Q6P4E1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.02■□□□□ 0.64
CASC4Q6P4E1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CASC4Q6P4E1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CASC4Q6P4E1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.02■□□□□ 0.64
CASC4Q6P4E1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CASC4Q6P4E1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CASC4Q6P4E1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CASC4Q6P4E1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.02■□□□□ 0.64
CASC4Q6P4E1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.02■□□□□ 0.64
CASC4Q6P4E1 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.02■□□□□ 0.64
CASC4Q6P4E1 AL031985.4-201ENST00000642138 673 ntBASIC19.02■□□□□ 0.64
CASC4Q6P4E1 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
CASC4Q6P4E1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CASC4Q6P4E1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms