Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.61■■□□□ 1.05
KRT40Q6A162 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.61■■□□□ 1.05
KRT40Q6A162 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
KRT40Q6A162 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
KRT40Q6A162 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KRT40Q6A162 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
KRT40Q6A162 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
KRT40Q6A162 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
KRT40Q6A162 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.61■■□□□ 1.05
KRT40Q6A162 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.6■■□□□ 1.05
KRT40Q6A162 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT40Q6A162 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
KRT40Q6A162 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT40Q6A162 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT40Q6A162 AL109659.2-201ENST00000606809 1674 ntBASIC21.6■■□□□ 1.05
KRT40Q6A162 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT40Q6A162 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT40Q6A162 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT40Q6A162 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
KRT40Q6A162 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT40Q6A162 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
KRT40Q6A162 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT40Q6A162 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
KRT40Q6A162 SLC25A3P1-201ENST00000443844 931 ntBASIC21.6■■□□□ 1.05
KRT40Q6A162 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT40Q6A162 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
KRT40Q6A162 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
KRT40Q6A162 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT40Q6A162 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
KRT40Q6A162 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT40Q6A162 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT40Q6A162 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
KRT40Q6A162 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT40Q6A162 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.59■■□□□ 1.05
KRT40Q6A162 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.59■■□□□ 1.05
KRT40Q6A162 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
KRT40Q6A162 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRT40Q6A162 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRT40Q6A162 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRT40Q6A162 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.59■■□□□ 1.05
KRT40Q6A162 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.59■■□□□ 1.05
KRT40Q6A162 FITM1-202ENST00000559294 800 ntBASIC21.59■■□□□ 1.05
KRT40Q6A162 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.59■■□□□ 1.05
KRT40Q6A162 NAPSB-206ENST00000562112 1266 ntBASIC21.59■■□□□ 1.05
KRT40Q6A162 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.59■■□□□ 1.05
KRT40Q6A162 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.59■■□□□ 1.05
KRT40Q6A162 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
KRT40Q6A162 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRT40Q6A162 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRT40Q6A162 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
KRT40Q6A162 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
KRT40Q6A162 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KRT40Q6A162 KRT18P22-201ENST00000402024 1347 ntBASIC21.58■■□□□ 1.05
KRT40Q6A162 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KRT40Q6A162 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KRT40Q6A162 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
KRT40Q6A162 MIR4674-201ENST00000582457 87 ntBASIC21.58■■□□□ 1.05
KRT40Q6A162 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.58■■□□□ 1.05
KRT40Q6A162 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KRT40Q6A162 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.58■■□□□ 1.05
KRT40Q6A162 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.58■■□□□ 1.05
KRT40Q6A162 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
KRT40Q6A162 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
KRT40Q6A162 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
KRT40Q6A162 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
KRT40Q6A162 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.58■■□□□ 1.04
KRT40Q6A162 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
KRT40Q6A162 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.58■■□□□ 1.04
KRT40Q6A162 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
KRT40Q6A162 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
KRT40Q6A162 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
KRT40Q6A162 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
KRT40Q6A162 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
KRT40Q6A162 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KRT40Q6A162 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
KRT40Q6A162 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.57■■□□□ 1.04
KRT40Q6A162 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KRT40Q6A162 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KRT40Q6A162 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.57■■□□□ 1.04
KRT40Q6A162 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
KRT40Q6A162 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.57■■□□□ 1.04
KRT40Q6A162 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.57■■□□□ 1.04
KRT40Q6A162 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.57■■□□□ 1.04
KRT40Q6A162 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.57■■□□□ 1.04
KRT40Q6A162 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.57■■□□□ 1.04
KRT40Q6A162 AC010203.1-204ENST00000548782 407 ntBASIC21.57■■□□□ 1.04
KRT40Q6A162 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
KRT40Q6A162 AL023803.3-201ENST00000615559 522 ntBASIC21.57■■□□□ 1.04
KRT40Q6A162 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
KRT40Q6A162 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
KRT40Q6A162 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KRT40Q6A162 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KRT40Q6A162 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KRT40Q6A162 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KRT40Q6A162 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KRT40Q6A162 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
KRT40Q6A162 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
KRT40Q6A162 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KRT40Q6A162 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KRT40Q6A162 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms