Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRK2Q5S007 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
LRRK2Q5S007 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRK2Q5S007 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRK2Q5S007 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRK2Q5S007 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRK2Q5S007 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRK2Q5S007 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRK2Q5S007 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.14■□□□□ 0.17
LRRK2Q5S007 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.14■□□□□ 0.17
LRRK2Q5S007 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.14■□□□□ 0.17
LRRK2Q5S007 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRK2Q5S007 AC005225.4-201ENST00000557330 545 ntBASIC16.14■□□□□ 0.17
LRRK2Q5S007 AL139288.1-201ENST00000623748 933 ntBASIC16.14■□□□□ 0.17
LRRK2Q5S007 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.14■□□□□ 0.17
LRRK2Q5S007 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRK2Q5S007 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRK2Q5S007 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRK2Q5S007 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRK2Q5S007 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRK2Q5S007 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRK2Q5S007 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRK2Q5S007 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRK2Q5S007 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
LRRK2Q5S007 AC005034.1-201ENST00000426657 489 ntBASIC16.13■□□□□ 0.17
LRRK2Q5S007 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.13■□□□□ 0.17
LRRK2Q5S007 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.13■□□□□ 0.17
LRRK2Q5S007 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.13■□□□□ 0.17
LRRK2Q5S007 C20orf181-201ENST00000623918 480 ntBASIC16.13■□□□□ 0.17
LRRK2Q5S007 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRK2Q5S007 SDHAP1-207ENST00000440850 2000 ntBASIC16.13■□□□□ 0.17
LRRK2Q5S007 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LRRK2Q5S007 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRK2Q5S007 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRK2Q5S007 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRK2Q5S007 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LRRK2Q5S007 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRK2Q5S007 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRK2Q5S007 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRK2Q5S007 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRK2Q5S007 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRK2Q5S007 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRK2Q5S007 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.13■□□□□ 0.17
LRRK2Q5S007 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.13■□□□□ 0.17
LRRK2Q5S007 AC105339.3-201ENST00000560043 636 ntBASIC16.13■□□□□ 0.17
LRRK2Q5S007 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.13■□□□□ 0.17
LRRK2Q5S007 AJ011932.1-201ENST00000621707 465 ntBASIC16.13■□□□□ 0.17
LRRK2Q5S007 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRK2Q5S007 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LRRK2Q5S007 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRK2Q5S007 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LRRK2Q5S007 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRK2Q5S007 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.12■□□□□ 0.17
LRRK2Q5S007 AC009947.1-201ENST00000444350 727 ntBASIC16.12■□□□□ 0.17
LRRK2Q5S007 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRK2Q5S007 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.12■□□□□ 0.17
LRRK2Q5S007 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRK2Q5S007 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRK2Q5S007 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRK2Q5S007 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
LRRK2Q5S007 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRK2Q5S007 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRK2Q5S007 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRK2Q5S007 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRK2Q5S007 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRK2Q5S007 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRK2Q5S007 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.12■□□□□ 0.17
LRRK2Q5S007 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
LRRK2Q5S007 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRK2Q5S007 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.12■□□□□ 0.17
LRRK2Q5S007 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRK2Q5S007 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.12■□□□□ 0.17
LRRK2Q5S007 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRK2Q5S007 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRK2Q5S007 AC008556.1-201ENST00000610908 2040 ntBASIC16.12■□□□□ 0.17
LRRK2Q5S007 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRK2Q5S007 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRK2Q5S007 AL356309.3-201ENST00000624132 1934 ntBASIC16.11■□□□□ 0.17
LRRK2Q5S007 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRK2Q5S007 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LRRK2Q5S007 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRK2Q5S007 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRK2Q5S007 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRK2Q5S007 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRK2Q5S007 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRK2Q5S007 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRK2Q5S007 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRK2Q5S007 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.11■□□□□ 0.17
LRRK2Q5S007 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LRRK2Q5S007 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.11■□□□□ 0.17
LRRK2Q5S007 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRK2Q5S007 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRK2Q5S007 AC009237.14-201ENST00000609975 1594 ntBASIC16.11■□□□□ 0.17
LRRK2Q5S007 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRK2Q5S007 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LRRK2Q5S007 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.11■□□□□ 0.17
LRRK2Q5S007 ABCD1P5-201ENST00000445663 754 ntBASIC16.11■□□□□ 0.17
LRRK2Q5S007 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRK2Q5S007 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRK2Q5S007 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms