Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 AL023284.2-201ENST00000405850 579 ntBASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 DGCR10-201ENST00000609839 495 ntBASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATP13A4Q4VNC1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ATP13A4Q4VNC1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ATP13A4Q4VNC1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP13A4Q4VNC1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
ATP13A4Q4VNC1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP13A4Q4VNC1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.45■□□□□ 0.7
ATP13A4Q4VNC1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.45■□□□□ 0.7
ATP13A4Q4VNC1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP13A4Q4VNC1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.45■□□□□ 0.7
ATP13A4Q4VNC1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATP13A4Q4VNC1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.45■□□□□ 0.7
ATP13A4Q4VNC1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.45■□□□□ 0.7
ATP13A4Q4VNC1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.45■□□□□ 0.7
ATP13A4Q4VNC1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ATP13A4Q4VNC1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.45■□□□□ 0.7
ATP13A4Q4VNC1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ATP13A4Q4VNC1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATP13A4Q4VNC1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATP13A4Q4VNC1 AL133373.2-201ENST00000623187 2828 ntBASIC19.45■□□□□ 0.7
ATP13A4Q4VNC1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ATP13A4Q4VNC1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP13A4Q4VNC1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
ATP13A4Q4VNC1 AC099343.3-201ENST00000605834 2503 ntBASIC19.45■□□□□ 0.7
ATP13A4Q4VNC1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP13A4Q4VNC1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP13A4Q4VNC1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP13A4Q4VNC1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
ATP13A4Q4VNC1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP13A4Q4VNC1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP13A4Q4VNC1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP13A4Q4VNC1 AL109659.2-201ENST00000606809 1674 ntBASIC19.44■□□□□ 0.7
ATP13A4Q4VNC1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP13A4Q4VNC1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP13A4Q4VNC1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP13A4Q4VNC1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP13A4Q4VNC1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.44■□□□□ 0.7
ATP13A4Q4VNC1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.44■□□□□ 0.7
ATP13A4Q4VNC1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.44■□□□□ 0.7
ATP13A4Q4VNC1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP13A4Q4VNC1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP13A4Q4VNC1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.44■□□□□ 0.7
ATP13A4Q4VNC1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP13A4Q4VNC1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ATP13A4Q4VNC1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms