Protein–RNA interactions for Protein: Q4G0U5

CFAP221, Cilia- and flagella-associated protein 221, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP221Q4G0U5 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CFAP221Q4G0U5 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CFAP221Q4G0U5 AC113347.1-201ENST00000413321 391 ntBASIC20.32■□□□□ 0.84
CFAP221Q4G0U5 SLC25A1P2-201ENST00000430693 912 ntBASIC20.32■□□□□ 0.84
CFAP221Q4G0U5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.32■□□□□ 0.84
CFAP221Q4G0U5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.32■□□□□ 0.84
CFAP221Q4G0U5 KRT18P21-201ENST00000515767 1272 ntBASIC20.32■□□□□ 0.84
CFAP221Q4G0U5 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.32■□□□□ 0.84
CFAP221Q4G0U5 CKBP1-201ENST00000565489 1086 ntBASIC20.32■□□□□ 0.84
CFAP221Q4G0U5 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.32■□□□□ 0.84
CFAP221Q4G0U5 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CFAP221Q4G0U5 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.32■□□□□ 0.84
CFAP221Q4G0U5 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CFAP221Q4G0U5 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CFAP221Q4G0U5 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CFAP221Q4G0U5 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CFAP221Q4G0U5 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.32■□□□□ 0.84
CFAP221Q4G0U5 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.32■□□□□ 0.84
CFAP221Q4G0U5 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CFAP221Q4G0U5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CFAP221Q4G0U5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CFAP221Q4G0U5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 AC128688.1-201ENST00000487626 519 ntBASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 FP475955.4-201ENST00000623131 1990 ntBASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CFAP221Q4G0U5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 AC005332.8-201ENST00000622750 2735 ntBASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 HCG11-201ENST00000411553 5696 ntBASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 SLC25A3P1-201ENST00000443844 931 ntBASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 CA15P1-201ENST00000481698 905 ntBASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 PRSS44-201ENST00000515154 1146 ntBASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CFAP221Q4G0U5 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.29■□□□□ 0.84
CFAP221Q4G0U5 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.29■□□□□ 0.84
CFAP221Q4G0U5 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.29■□□□□ 0.84
CFAP221Q4G0U5 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CFAP221Q4G0U5 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
CFAP221Q4G0U5 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.29■□□□□ 0.84
CFAP221Q4G0U5 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.29■□□□□ 0.84
CFAP221Q4G0U5 AC092865.7-201ENST00000641832 219 ntBASIC20.29■□□□□ 0.84
CFAP221Q4G0U5 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
CFAP221Q4G0U5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CFAP221Q4G0U5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CFAP221Q4G0U5 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.29■□□□□ 0.84
CFAP221Q4G0U5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.29■□□□□ 0.84
CFAP221Q4G0U5 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CFAP221Q4G0U5 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CFAP221Q4G0U5 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CFAP221Q4G0U5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CFAP221Q4G0U5 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms