Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC144BQ3MJ40 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CCDC144BQ3MJ40 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.63■■□□□ 1.05
CCDC144BQ3MJ40 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
CCDC144BQ3MJ40 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC144BQ3MJ40 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC144BQ3MJ40 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CCDC144BQ3MJ40 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.63■■□□□ 1.05
CCDC144BQ3MJ40 AC093458.2-201ENST00000623150 629 ntBASIC21.63■■□□□ 1.05
CCDC144BQ3MJ40 AC116407.4-201ENST00000623319 1061 ntBASIC21.63■■□□□ 1.05
CCDC144BQ3MJ40 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC144BQ3MJ40 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CCDC144BQ3MJ40 AC006333.2-201ENST00000607957 2099 ntBASIC21.63■■□□□ 1.05
CCDC144BQ3MJ40 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CCDC144BQ3MJ40 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CCDC144BQ3MJ40 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CCDC144BQ3MJ40 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC144BQ3MJ40 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC144BQ3MJ40 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC144BQ3MJ40 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC144BQ3MJ40 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC144BQ3MJ40 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC144BQ3MJ40 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC144BQ3MJ40 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.62■■□□□ 1.05
CCDC144BQ3MJ40 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC144BQ3MJ40 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC144BQ3MJ40 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CCDC144BQ3MJ40 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC144BQ3MJ40 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC144BQ3MJ40 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC144BQ3MJ40 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC144BQ3MJ40 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC144BQ3MJ40 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.62■■□□□ 1.05
CCDC144BQ3MJ40 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC144BQ3MJ40 KRT126P-201ENST00000549467 1181 ntBASIC21.62■■□□□ 1.05
CCDC144BQ3MJ40 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC144BQ3MJ40 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC144BQ3MJ40 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
CCDC144BQ3MJ40 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC144BQ3MJ40 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.62■■□□□ 1.05
CCDC144BQ3MJ40 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC144BQ3MJ40 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC144BQ3MJ40 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
CCDC144BQ3MJ40 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC144BQ3MJ40 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC144BQ3MJ40 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC144BQ3MJ40 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC144BQ3MJ40 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144BQ3MJ40 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144BQ3MJ40 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144BQ3MJ40 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144BQ3MJ40 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144BQ3MJ40 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144BQ3MJ40 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC144BQ3MJ40 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144BQ3MJ40 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CCDC144BQ3MJ40 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC144BQ3MJ40 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.61■■□□□ 1.05
CCDC144BQ3MJ40 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CCDC144BQ3MJ40 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144BQ3MJ40 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC144BQ3MJ40 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144BQ3MJ40 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.61■■□□□ 1.05
CCDC144BQ3MJ40 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144BQ3MJ40 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144BQ3MJ40 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CCDC144BQ3MJ40 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144BQ3MJ40 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144BQ3MJ40 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144BQ3MJ40 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144BQ3MJ40 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144BQ3MJ40 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 AP000523.1-201ENST00000398242 1049 ntBASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 KRT18P48-201ENST00000434763 852 ntBASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC144BQ3MJ40 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms