Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCAPQ12770 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCAPQ12770 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCAPQ12770 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.24■□□□□ 0.67
SCAPQ12770 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCAPQ12770 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.24■□□□□ 0.67
SCAPQ12770 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCAPQ12770 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCAPQ12770 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCAPQ12770 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCAPQ12770 MYLKP1-201ENST00000509077 1580 ntBASIC19.23■□□□□ 0.67
SCAPQ12770 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCAPQ12770 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCAPQ12770 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCAPQ12770 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.23■□□□□ 0.67
SCAPQ12770 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.23■□□□□ 0.67
SCAPQ12770 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCAPQ12770 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCAPQ12770 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCAPQ12770 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCAPQ12770 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCAPQ12770 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.23■□□□□ 0.67
SCAPQ12770 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCAPQ12770 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCAPQ12770 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCAPQ12770 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SCAPQ12770 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCAPQ12770 KRT18P23-201ENST00000435622 1283 ntBASIC19.23■□□□□ 0.67
SCAPQ12770 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCAPQ12770 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCAPQ12770 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCAPQ12770 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCAPQ12770 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCAPQ12770 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.23■□□□□ 0.67
SCAPQ12770 AC010203.1-204ENST00000548782 407 ntBASIC19.23■□□□□ 0.67
SCAPQ12770 AC006011.2-201ENST00000621313 1158 ntBASIC19.23■□□□□ 0.67
SCAPQ12770 AC112497.1-201ENST00000624824 639 ntBASIC19.23■□□□□ 0.67
SCAPQ12770 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
SCAPQ12770 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCAPQ12770 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.23■□□□□ 0.67
SCAPQ12770 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCAPQ12770 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
SCAPQ12770 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SCAPQ12770 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCAPQ12770 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCAPQ12770 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCAPQ12770 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.22■□□□□ 0.67
SCAPQ12770 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SCAPQ12770 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCAPQ12770 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCAPQ12770 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCAPQ12770 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCAPQ12770 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCAPQ12770 ATP5G1P1-201ENST00000448724 379 ntBASIC19.22■□□□□ 0.67
SCAPQ12770 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SCAPQ12770 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SCAPQ12770 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.22■□□□□ 0.67
SCAPQ12770 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.22■□□□□ 0.67
SCAPQ12770 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.22■□□□□ 0.67
SCAPQ12770 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.22■□□□□ 0.67
SCAPQ12770 AC141257.4-201ENST00000634557 245 ntBASIC19.22■□□□□ 0.67
SCAPQ12770 AC136944.6-201ENST00000634818 245 ntBASIC19.22■□□□□ 0.67
SCAPQ12770 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SCAPQ12770 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCAPQ12770 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SCAPQ12770 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.22■□□□□ 0.67
SCAPQ12770 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCAPQ12770 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.22■□□□□ 0.67
SCAPQ12770 AC126763.1-201ENST00000552015 2118 ntBASIC19.22■□□□□ 0.67
SCAPQ12770 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCAPQ12770 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCAPQ12770 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCAPQ12770 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCAPQ12770 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCAPQ12770 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCAPQ12770 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SCAPQ12770 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SCAPQ12770 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCAPQ12770 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.21■□□□□ 0.67
SCAPQ12770 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCAPQ12770 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.21■□□□□ 0.67
SCAPQ12770 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCAPQ12770 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SCAPQ12770 AP000523.1-201ENST00000398242 1049 ntBASIC19.21■□□□□ 0.67
SCAPQ12770 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.21■□□□□ 0.67
SCAPQ12770 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.21■□□□□ 0.67
SCAPQ12770 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SCAPQ12770 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SCAPQ12770 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SCAPQ12770 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCAPQ12770 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.21■□□□□ 0.67
SCAPQ12770 AC104390.1-201ENST00000555663 520 ntBASIC19.21■□□□□ 0.67
SCAPQ12770 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.21■□□□□ 0.67
SCAPQ12770 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.21■□□□□ 0.67
SCAPQ12770 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.21■□□□□ 0.67
SCAPQ12770 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.21■□□□□ 0.67
SCAPQ12770 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.21■□□□□ 0.67
SCAPQ12770 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SCAPQ12770 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.21■□□□□ 0.67
SCAPQ12770 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms