Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS3AP61247 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RPS3AP61247 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.48■□□□□ 0.39
RPS3AP61247 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.48■□□□□ 0.39
RPS3AP61247 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RPS3AP61247 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.48■□□□□ 0.39
RPS3AP61247 AL445675.2-201ENST00000620291 557 ntBASIC17.48■□□□□ 0.39
RPS3AP61247 AC131212.4-201ENST00000623606 975 ntBASIC17.48■□□□□ 0.39
RPS3AP61247 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.48■□□□□ 0.39
RPS3AP61247 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS3AP61247 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RPS3AP61247 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RPS3AP61247 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS3AP61247 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS3AP61247 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS3AP61247 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS3AP61247 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS3AP61247 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RPS3AP61247 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RPS3AP61247 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS3AP61247 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS3AP61247 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.47■□□□□ 0.39
RPS3AP61247 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RPS3AP61247 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RPS3AP61247 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RPS3AP61247 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.47■□□□□ 0.39
RPS3AP61247 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RPS3AP61247 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RPS3AP61247 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS3AP61247 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS3AP61247 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RPS3AP61247 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.47■□□□□ 0.39
RPS3AP61247 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.47■□□□□ 0.39
RPS3AP61247 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS3AP61247 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS3AP61247 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RPS3AP61247 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.47■□□□□ 0.39
RPS3AP61247 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
RPS3AP61247 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.47■□□□□ 0.39
RPS3AP61247 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RPS3AP61247 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.47■□□□□ 0.39
RPS3AP61247 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.47■□□□□ 0.39
RPS3AP61247 AC026471.5-201ENST00000615068 467 ntBASIC17.47■□□□□ 0.39
RPS3AP61247 AL031985.4-201ENST00000642138 673 ntBASIC17.47■□□□□ 0.39
RPS3AP61247 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.47■□□□□ 0.39
RPS3AP61247 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS3AP61247 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RPS3AP61247 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS3AP61247 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
RPS3AP61247 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS3AP61247 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS3AP61247 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS3AP61247 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS3AP61247 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RPS3AP61247 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS3AP61247 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.47■□□□□ 0.39
RPS3AP61247 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
RPS3AP61247 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
RPS3AP61247 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS3AP61247 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS3AP61247 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS3AP61247 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS3AP61247 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
RPS3AP61247 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.46■□□□□ 0.39
RPS3AP61247 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RPS3AP61247 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS3AP61247 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS3AP61247 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RPS3AP61247 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS3AP61247 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.46■□□□□ 0.39
RPS3AP61247 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.46■□□□□ 0.39
RPS3AP61247 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.46■□□□□ 0.39
RPS3AP61247 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS3AP61247 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.46■□□□□ 0.39
RPS3AP61247 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS3AP61247 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.46■□□□□ 0.39
RPS3AP61247 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
RPS3AP61247 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.46■□□□□ 0.39
RPS3AP61247 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.46■□□□□ 0.39
RPS3AP61247 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RPS3AP61247 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.46■□□□□ 0.39
RPS3AP61247 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RPS3AP61247 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.46■□□□□ 0.39
RPS3AP61247 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.46■□□□□ 0.39
RPS3AP61247 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.46■□□□□ 0.39
RPS3AP61247 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS3AP61247 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RPS3AP61247 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS3AP61247 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS3AP61247 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
RPS3AP61247 WIZP1-201ENST00000531444 2299 ntBASIC17.46■□□□□ 0.39
RPS3AP61247 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS3AP61247 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RPS3AP61247 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RPS3AP61247 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
RPS3AP61247 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPS3AP61247 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RPS3AP61247 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPS3AP61247 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.45■□□□□ 0.38
RPS3AP61247 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms