Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL160286.2-201ENST00000567150 934 ntBASIC19.96■□□□□ 0.79
VCPP55072 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
VCPP55072 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
VCPP55072 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCPP55072 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
VCPP55072 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.96■□□□□ 0.79
VCPP55072 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
VCPP55072 SDHAP1-207ENST00000440850 2000 ntBASIC19.96■□□□□ 0.79
VCPP55072 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
VCPP55072 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCPP55072 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.96■□□□□ 0.79
VCPP55072 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.96■□□□□ 0.79
VCPP55072 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCPP55072 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VCPP55072 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.96■□□□□ 0.79
VCPP55072 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
VCPP55072 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
VCPP55072 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.79
VCPP55072 AC096733.2-201ENST00000609937 1394 ntBASIC19.95■□□□□ 0.79
VCPP55072 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.95■□□□□ 0.78
VCPP55072 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.95■□□□□ 0.78
VCPP55072 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VCPP55072 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VCPP55072 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
VCPP55072 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
VCPP55072 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCPP55072 AC004870.1-201ENST00000315132 882 ntBASIC19.95■□□□□ 0.78
VCPP55072 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCPP55072 KRT17P6-201ENST00000453795 1220 ntBASIC19.95■□□□□ 0.78
VCPP55072 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.95■□□□□ 0.78
VCPP55072 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.95■□□□□ 0.78
VCPP55072 PRELID1P1-202ENST00000567272 903 ntBASIC19.95■□□□□ 0.78
VCPP55072 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.95■□□□□ 0.78
VCPP55072 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.95■□□□□ 0.78
VCPP55072 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
VCPP55072 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
VCPP55072 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCPP55072 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VCPP55072 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.95■□□□□ 0.78
VCPP55072 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.95■□□□□ 0.78
VCPP55072 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.95■□□□□ 0.78
VCPP55072 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.95■□□□□ 0.78
VCPP55072 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VCPP55072 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCPP55072 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCPP55072 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VCPP55072 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.95■□□□□ 0.78
VCPP55072 AL138781.2-201ENST00000617896 1843 ntBASIC19.95■□□□□ 0.78
VCPP55072 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCPP55072 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCPP55072 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCPP55072 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
VCPP55072 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VCPP55072 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
VCPP55072 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
VCPP55072 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCPP55072 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCPP55072 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCPP55072 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCPP55072 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
VCPP55072 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.94■□□□□ 0.78
VCPP55072 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.94■□□□□ 0.78
VCPP55072 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.94■□□□□ 0.78
VCPP55072 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.94■□□□□ 0.78
VCPP55072 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VCPP55072 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
VCPP55072 AC092119.3-201ENST00000612618 583 ntBASIC19.94■□□□□ 0.78
VCPP55072 AC083849.1-201ENST00000615227 514 ntBASIC19.94■□□□□ 0.78
VCPP55072 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.94■□□□□ 0.78
VCPP55072 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCPP55072 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.94■□□□□ 0.78
VCPP55072 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCPP55072 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
VCPP55072 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
VCPP55072 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCPP55072 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCPP55072 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.94■□□□□ 0.78
VCPP55072 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
VCPP55072 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.94■□□□□ 0.78
VCPP55072 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VCPP55072 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
VCPP55072 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCPP55072 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCPP55072 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCPP55072 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
VCPP55072 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCPP55072 AC006333.2-201ENST00000607957 2099 ntBASIC19.93■□□□□ 0.78
VCPP55072 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCPP55072 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCPP55072 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.93■□□□□ 0.78
VCPP55072 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.93■□□□□ 0.78
VCPP55072 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.93■□□□□ 0.78
VCPP55072 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.93■□□□□ 0.78
VCPP55072 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VCPP55072 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
VCPP55072 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCPP55072 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VCPP55072 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
VCPP55072 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.93■□□□□ 0.78
VCPP55072 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms