Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
NEK4P51957 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
NEK4P51957 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
NEK4P51957 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NEK4P51957 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC22.24■■□□□ 1.15
NEK4P51957 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.24■■□□□ 1.15
NEK4P51957 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.24■■□□□ 1.15
NEK4P51957 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NEK4P51957 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.24■■□□□ 1.15
NEK4P51957 RCC2P3-201ENST00000418112 1537 ntBASIC22.24■■□□□ 1.15
NEK4P51957 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC22.24■■□□□ 1.15
NEK4P51957 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NEK4P51957 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NEK4P51957 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NEK4P51957 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NEK4P51957 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
NEK4P51957 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NEK4P51957 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
NEK4P51957 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NEK4P51957 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC22.24■■□□□ 1.15
NEK4P51957 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NEK4P51957 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC22.24■■□□□ 1.15
NEK4P51957 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
NEK4P51957 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NEK4P51957 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC22.23■■□□□ 1.15
NEK4P51957 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC22.23■■□□□ 1.15
NEK4P51957 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NEK4P51957 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.15
NEK4P51957 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC22.23■■□□□ 1.15
NEK4P51957 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NEK4P51957 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NEK4P51957 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NEK4P51957 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
NEK4P51957 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NEK4P51957 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
NEK4P51957 AC026271.3-201ENST00000571884 352 ntBASIC22.23■■□□□ 1.15
NEK4P51957 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NEK4P51957 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC22.23■■□□□ 1.15
NEK4P51957 AC073195.1-201ENST00000607241 877 ntBASIC22.23■■□□□ 1.15
NEK4P51957 AL162741.1-201ENST00000565563 1558 ntBASIC22.23■■□□□ 1.15
NEK4P51957 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
NEK4P51957 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
NEK4P51957 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC22.23■■□□□ 1.15
NEK4P51957 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC22.23■■□□□ 1.15
NEK4P51957 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC22.23■■□□□ 1.15
NEK4P51957 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
NEK4P51957 AC135776.1-201ENST00000319817 2481 ntBASIC22.22■■□□□ 1.15
NEK4P51957 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NEK4P51957 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC22.22■■□□□ 1.15
NEK4P51957 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NEK4P51957 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NEK4P51957 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.22■■□□□ 1.15
NEK4P51957 FAM207BP-201ENST00000447172 505 ntBASIC22.22■■□□□ 1.15
NEK4P51957 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC22.22■■□□□ 1.15
NEK4P51957 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.22■■□□□ 1.15
NEK4P51957 RARRES2P10-201ENST00000564312 460 ntBASIC22.22■■□□□ 1.15
NEK4P51957 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC22.22■■□□□ 1.15
NEK4P51957 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NEK4P51957 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
NEK4P51957 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NEK4P51957 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NEK4P51957 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NEK4P51957 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NEK4P51957 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
NEK4P51957 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC22.22■■□□□ 1.15
NEK4P51957 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NEK4P51957 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NEK4P51957 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC22.22■■□□□ 1.15
NEK4P51957 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC22.22■■□□□ 1.15
NEK4P51957 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NEK4P51957 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NEK4P51957 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
NEK4P51957 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
NEK4P51957 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NEK4P51957 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NEK4P51957 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC22.21■■□□□ 1.15
NEK4P51957 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC22.21■■□□□ 1.15
NEK4P51957 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.21■■□□□ 1.15
NEK4P51957 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.21■■□□□ 1.15
NEK4P51957 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.21■■□□□ 1.15
NEK4P51957 MIR6786-201ENST00000616843 113 ntBASIC22.21■■□□□ 1.15
NEK4P51957 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC22.21■■□□□ 1.15
NEK4P51957 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC22.21■■□□□ 1.15
NEK4P51957 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
NEK4P51957 PCDHB18P-201ENST00000524813 2368 ntBASIC22.21■■□□□ 1.15
NEK4P51957 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC22.21■■□□□ 1.15
NEK4P51957 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
NEK4P51957 KRT8P45-201ENST00000414328 1447 ntBASIC22.21■■□□□ 1.15
NEK4P51957 AC112777.1-201ENST00000540175 1423 ntBASIC22.21■■□□□ 1.15
NEK4P51957 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NEK4P51957 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC22.21■■□□□ 1.15
NEK4P51957 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
NEK4P51957 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC22.21■■□□□ 1.15
NEK4P51957 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC22.21■■□□□ 1.15
NEK4P51957 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC22.21■■□□□ 1.15
NEK4P51957 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
NEK4P51957 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NEK4P51957 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
NEK4P51957 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
NEK4P51957 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms