Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.24■□□□□ 0.19
HCFC1P51610 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.24■□□□□ 0.19
HCFC1P51610 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.24■□□□□ 0.19
HCFC1P51610 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC1P51610 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.23■□□□□ 0.19
HCFC1P51610 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.23■□□□□ 0.19
HCFC1P51610 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC1P51610 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
HCFC1P51610 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC1P51610 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.23■□□□□ 0.19
HCFC1P51610 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.23■□□□□ 0.19
HCFC1P51610 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
HCFC1P51610 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC1P51610 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC1P51610 AC091607.1-201ENST00000490318 1060 ntBASIC16.23■□□□□ 0.19
HCFC1P51610 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.23■□□□□ 0.19
HCFC1P51610 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
HCFC1P51610 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.23■□□□□ 0.19
HCFC1P51610 Z69720.1-201ENST00000601483 472 ntBASIC16.23■□□□□ 0.19
HCFC1P51610 AL592071.1-201ENST00000611956 408 ntBASIC16.23■□□□□ 0.19
HCFC1P51610 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC1P51610 TP73-AS1-207ENST00000624167 988 ntBASIC16.23■□□□□ 0.19
HCFC1P51610 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC1P51610 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC1P51610 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC1P51610 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC1P51610 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.23■□□□□ 0.19
HCFC1P51610 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.23■□□□□ 0.19
HCFC1P51610 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC1P51610 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC1P51610 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC1P51610 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.23■□□□□ 0.19
HCFC1P51610 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC1P51610 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC1P51610 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.23■□□□□ 0.19
HCFC1P51610 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC1P51610 AL121772.3-201ENST00000610840 674 ntBASIC16.23■□□□□ 0.19
HCFC1P51610 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
HCFC1P51610 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HCFC1P51610 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HCFC1P51610 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.22■□□□□ 0.19
HCFC1P51610 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
HCFC1P51610 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.22■□□□□ 0.19
HCFC1P51610 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.22■□□□□ 0.19
HCFC1P51610 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.22■□□□□ 0.19
HCFC1P51610 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HCFC1P51610 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
HCFC1P51610 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HCFC1P51610 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HCFC1P51610 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HCFC1P51610 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.22■□□□□ 0.19
HCFC1P51610 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.22■□□□□ 0.19
HCFC1P51610 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HCFC1P51610 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.22■□□□□ 0.19
HCFC1P51610 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.22■□□□□ 0.19
HCFC1P51610 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.22■□□□□ 0.19
HCFC1P51610 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HCFC1P51610 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.22■□□□□ 0.19
HCFC1P51610 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HCFC1P51610 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.22■□□□□ 0.19
HCFC1P51610 REXO1L6P-202ENST00000619970 1078 ntBASIC16.22■□□□□ 0.19
HCFC1P51610 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.22■□□□□ 0.19
HCFC1P51610 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.22■□□□□ 0.19
HCFC1P51610 AL109659.2-201ENST00000606809 1674 ntBASIC16.22■□□□□ 0.19
HCFC1P51610 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HCFC1P51610 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
HCFC1P51610 AC087289.5-201ENST00000586076 3175 ntBASIC16.21■□□□□ 0.19
HCFC1P51610 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.21■□□□□ 0.19
HCFC1P51610 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC1P51610 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC1P51610 AKR1C7P-201ENST00000305623 895 ntBASIC16.21■□□□□ 0.19
HCFC1P51610 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC1P51610 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
HCFC1P51610 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HCFC1P51610 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.21■□□□□ 0.19
HCFC1P51610 AC090616.6-201ENST00000582640 721 ntBASIC16.21■□□□□ 0.19
HCFC1P51610 AL773604.1-201ENST00000617417 272 ntBASIC16.21■□□□□ 0.19
HCFC1P51610 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC1P51610 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC1P51610 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC1P51610 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.21■□□□□ 0.19
HCFC1P51610 AC008556.1-201ENST00000610908 2040 ntBASIC16.21■□□□□ 0.19
HCFC1P51610 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.21■□□□□ 0.19
HCFC1P51610 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC1P51610 RCC2P3-201ENST00000418112 1537 ntBASIC16.21■□□□□ 0.19
HCFC1P51610 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC1P51610 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HCFC1P51610 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC1P51610 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.21■□□□□ 0.19
HCFC1P51610 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
HCFC1P51610 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HCFC1P51610 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HCFC1P51610 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
HCFC1P51610 IGHV3-47-201ENST00000425060 335 ntBASIC16.21■□□□□ 0.18
HCFC1P51610 SAPCD2P3-201ENST00000455031 850 ntBASIC16.21■□□□□ 0.18
HCFC1P51610 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
HCFC1P51610 AC091304.2-201ENST00000564639 760 ntBASIC16.21■□□□□ 0.18
HCFC1P51610 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
HCFC1P51610 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.21■□□□□ 0.18
HCFC1P51610 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms