Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
LHX2P50458 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
LHX2P50458 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
LHX2P50458 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
LHX2P50458 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LHX2P50458 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LHX2P50458 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LHX2P50458 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LHX2P50458 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LHX2P50458 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
LHX2P50458 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LHX2P50458 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LHX2P50458 HLA-F-220ENST00000434407 884 ntBASIC16.64■□□□□ 0.25
LHX2P50458 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LHX2P50458 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.64■□□□□ 0.25
LHX2P50458 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.64■□□□□ 0.25
LHX2P50458 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.64■□□□□ 0.25
LHX2P50458 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LHX2P50458 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.64■□□□□ 0.25
LHX2P50458 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.64■□□□□ 0.25
LHX2P50458 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LHX2P50458 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LHX2P50458 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LHX2P50458 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.64■□□□□ 0.25
LHX2P50458 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LHX2P50458 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
LHX2P50458 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LHX2P50458 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.64■□□□□ 0.25
LHX2P50458 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LHX2P50458 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LHX2P50458 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LHX2P50458 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.64■□□□□ 0.25
LHX2P50458 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.64■□□□□ 0.25
LHX2P50458 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
LHX2P50458 IER3-202ENST00000376377 1350 ntBASIC16.64■□□□□ 0.25
LHX2P50458 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LHX2P50458 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LHX2P50458 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LHX2P50458 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LHX2P50458 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LHX2P50458 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LHX2P50458 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LHX2P50458 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LHX2P50458 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LHX2P50458 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LHX2P50458 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
LHX2P50458 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LHX2P50458 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LHX2P50458 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.63■□□□□ 0.25
LHX2P50458 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LHX2P50458 AP000593.1-201ENST00000393668 712 ntBASIC16.63■□□□□ 0.25
LHX2P50458 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.63■□□□□ 0.25
LHX2P50458 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LHX2P50458 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LHX2P50458 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.63■□□□□ 0.25
LHX2P50458 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.63■□□□□ 0.25
LHX2P50458 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.63■□□□□ 0.25
LHX2P50458 AL136038.4-201ENST00000603606 1261 ntBASIC16.63■□□□□ 0.25
LHX2P50458 AC116407.4-201ENST00000623319 1061 ntBASIC16.63■□□□□ 0.25
LHX2P50458 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LHX2P50458 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LHX2P50458 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.63■□□□□ 0.25
LHX2P50458 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LHX2P50458 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LHX2P50458 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.63■□□□□ 0.25
LHX2P50458 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LHX2P50458 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.63■□□□□ 0.25
LHX2P50458 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LHX2P50458 AL391807.1-203ENST00000604392 2365 ntBASIC16.63■□□□□ 0.25
LHX2P50458 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LHX2P50458 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LHX2P50458 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LHX2P50458 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.62■□□□□ 0.25
LHX2P50458 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.62■□□□□ 0.25
LHX2P50458 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LHX2P50458 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LHX2P50458 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
LHX2P50458 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LHX2P50458 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.62■□□□□ 0.25
LHX2P50458 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.62■□□□□ 0.25
LHX2P50458 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.62■□□□□ 0.25
LHX2P50458 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
LHX2P50458 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LHX2P50458 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.62■□□□□ 0.25
LHX2P50458 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LHX2P50458 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.62■□□□□ 0.25
LHX2P50458 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.62■□□□□ 0.25
LHX2P50458 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.62■□□□□ 0.25
LHX2P50458 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LHX2P50458 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LHX2P50458 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.62■□□□□ 0.25
LHX2P50458 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LHX2P50458 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LHX2P50458 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.62■□□□□ 0.25
LHX2P50458 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LHX2P50458 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.61■□□□□ 0.25
LHX2P50458 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
LHX2P50458 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LHX2P50458 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LHX2P50458 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms