Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NEDD4P46934 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.96■■□□□ 1.11
NEDD4P46934 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.96■■□□□ 1.11
NEDD4P46934 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NEDD4P46934 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NEDD4P46934 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.96■■□□□ 1.11
NEDD4P46934 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.96■■□□□ 1.11
NEDD4P46934 KRT18P41-201ENST00000518924 1277 ntBASIC21.96■■□□□ 1.11
NEDD4P46934 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.96■■□□□ 1.11
NEDD4P46934 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.96■■□□□ 1.11
NEDD4P46934 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
NEDD4P46934 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
NEDD4P46934 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.96■■□□□ 1.11
NEDD4P46934 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
NEDD4P46934 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.96■■□□□ 1.11
NEDD4P46934 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NEDD4P46934 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NEDD4P46934 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
NEDD4P46934 AC005082.1-201ENST00000413042 2259 ntBASIC21.95■■□□□ 1.11
NEDD4P46934 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
NEDD4P46934 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
NEDD4P46934 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.11
NEDD4P46934 AC099343.3-201ENST00000605834 2503 ntBASIC21.95■■□□□ 1.1
NEDD4P46934 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.95■■□□□ 1.1
NEDD4P46934 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.95■■□□□ 1.1
NEDD4P46934 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NEDD4P46934 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
NEDD4P46934 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.95■■□□□ 1.1
NEDD4P46934 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NEDD4P46934 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NEDD4P46934 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.95■■□□□ 1.1
NEDD4P46934 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.95■■□□□ 1.1
NEDD4P46934 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
NEDD4P46934 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
NEDD4P46934 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NEDD4P46934 AP000523.1-201ENST00000398242 1049 ntBASIC21.95■■□□□ 1.1
NEDD4P46934 SPDYE15P-201ENST00000424157 909 ntBASIC21.95■■□□□ 1.1
NEDD4P46934 KRT18P38-201ENST00000449496 1282 ntBASIC21.95■■□□□ 1.1
NEDD4P46934 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
NEDD4P46934 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.95■■□□□ 1.1
NEDD4P46934 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NEDD4P46934 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
NEDD4P46934 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.95■■□□□ 1.1
NEDD4P46934 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.95■■□□□ 1.1
NEDD4P46934 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NEDD4P46934 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.95■■□□□ 1.1
NEDD4P46934 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.94■■□□□ 1.1
NEDD4P46934 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.94■■□□□ 1.1
NEDD4P46934 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NEDD4P46934 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEDD4P46934 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEDD4P46934 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NEDD4P46934 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.94■■□□□ 1.1
NEDD4P46934 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NEDD4P46934 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEDD4P46934 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEDD4P46934 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEDD4P46934 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.94■■□□□ 1.1
NEDD4P46934 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NEDD4P46934 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEDD4P46934 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEDD4P46934 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NEDD4P46934 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
NEDD4P46934 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.94■■□□□ 1.1
NEDD4P46934 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.94■■□□□ 1.1
NEDD4P46934 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.94■■□□□ 1.1
NEDD4P46934 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NEDD4P46934 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEDD4P46934 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NEDD4P46934 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.94■■□□□ 1.1
NEDD4P46934 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEDD4P46934 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
NEDD4P46934 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NEDD4P46934 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.93■■□□□ 1.1
NEDD4P46934 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NEDD4P46934 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.93■■□□□ 1.1
NEDD4P46934 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.93■■□□□ 1.1
NEDD4P46934 RNF152P1-201ENST00000397754 604 ntBASIC21.93■■□□□ 1.1
NEDD4P46934 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.93■■□□□ 1.1
NEDD4P46934 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.93■■□□□ 1.1
NEDD4P46934 AC063952.2-201ENST00000498792 1227 ntBASIC21.93■■□□□ 1.1
NEDD4P46934 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.93■■□□□ 1.1
NEDD4P46934 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.93■■□□□ 1.1
NEDD4P46934 AC022616.7-201ENST00000525383 220 ntBASIC21.93■■□□□ 1.1
NEDD4P46934 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.93■■□□□ 1.1
NEDD4P46934 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.93■■□□□ 1.1
NEDD4P46934 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
NEDD4P46934 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
NEDD4P46934 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NEDD4P46934 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NEDD4P46934 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.93■■□□□ 1.1
NEDD4P46934 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
NEDD4P46934 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
NEDD4P46934 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.93■■□□□ 1.1
NEDD4P46934 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NEDD4P46934 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NEDD4P46934 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NEDD4P46934 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.92■■□□□ 1.1
NEDD4P46934 AC126763.1-201ENST00000552015 2118 ntBASIC21.92■■□□□ 1.1
NEDD4P46934 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms