Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 AC092338.2-201ENST00000568827 1415 ntBASIC17.27■□□□□ 0.35
LCN1P31025 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.27■□□□□ 0.35
LCN1P31025 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
LCN1P31025 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
LCN1P31025 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.35
LCN1P31025 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.27■□□□□ 0.35
LCN1P31025 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
LCN1P31025 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LCN1P31025 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LCN1P31025 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.27■□□□□ 0.35
LCN1P31025 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LCN1P31025 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LCN1P31025 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LCN1P31025 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
LCN1P31025 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.26■□□□□ 0.35
LCN1P31025 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
LCN1P31025 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.26■□□□□ 0.35
LCN1P31025 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LCN1P31025 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LCN1P31025 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.26■□□□□ 0.35
LCN1P31025 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LCN1P31025 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.26■□□□□ 0.35
LCN1P31025 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
LCN1P31025 AL023284.2-201ENST00000405850 579 ntBASIC17.26■□□□□ 0.35
LCN1P31025 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.26■□□□□ 0.35
LCN1P31025 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.26■□□□□ 0.35
LCN1P31025 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.26■□□□□ 0.35
LCN1P31025 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.26■□□□□ 0.35
LCN1P31025 AC008622.2-201ENST00000617006 1229 ntBASIC17.26■□□□□ 0.35
LCN1P31025 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LCN1P31025 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LCN1P31025 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LCN1P31025 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LCN1P31025 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LCN1P31025 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LCN1P31025 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LCN1P31025 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LCN1P31025 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.26■□□□□ 0.35
LCN1P31025 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LCN1P31025 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LCN1P31025 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.26■□□□□ 0.35
LCN1P31025 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.26■□□□□ 0.35
LCN1P31025 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LCN1P31025 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LCN1P31025 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LCN1P31025 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.25■□□□□ 0.35
LCN1P31025 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.25■□□□□ 0.35
LCN1P31025 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LCN1P31025 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LCN1P31025 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LCN1P31025 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.25■□□□□ 0.35
LCN1P31025 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.25■□□□□ 0.35
LCN1P31025 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.25■□□□□ 0.35
LCN1P31025 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LCN1P31025 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
LCN1P31025 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LCN1P31025 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.25■□□□□ 0.35
LCN1P31025 KRT18P41-201ENST00000518924 1277 ntBASIC17.25■□□□□ 0.35
LCN1P31025 NAPSB-206ENST00000562112 1266 ntBASIC17.25■□□□□ 0.35
LCN1P31025 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LCN1P31025 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LCN1P31025 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LCN1P31025 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LCN1P31025 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LCN1P31025 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LCN1P31025 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.25■□□□□ 0.35
LCN1P31025 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LCN1P31025 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LCN1P31025 MTMR9LP-203ENST00000426597 1545 ntBASIC17.25■□□□□ 0.35
LCN1P31025 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LCN1P31025 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.25■□□□□ 0.35
LCN1P31025 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.25■□□□□ 0.35
LCN1P31025 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LCN1P31025 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LCN1P31025 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LCN1P31025 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
LCN1P31025 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.25■□□□□ 0.35
LCN1P31025 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.24■□□□□ 0.35
LCN1P31025 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LCN1P31025 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
LCN1P31025 AC093503.3-201ENST00000624917 2352 ntBASIC17.24■□□□□ 0.35
LCN1P31025 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LCN1P31025 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LCN1P31025 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LCN1P31025 AC112777.1-201ENST00000540175 1423 ntBASIC17.24■□□□□ 0.35
LCN1P31025 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LCN1P31025 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.24■□□□□ 0.35
LCN1P31025 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
LCN1P31025 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LCN1P31025 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.24■□□□□ 0.35
LCN1P31025 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LCN1P31025 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.24■□□□□ 0.35
LCN1P31025 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LCN1P31025 AL512604.3-201ENST00000569583 964 ntBASIC17.24■□□□□ 0.35
LCN1P31025 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.24■□□□□ 0.35
LCN1P31025 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LCN1P31025 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.24■□□□□ 0.35
LCN1P31025 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.24■□□□□ 0.35
LCN1P31025 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LCN1P31025 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms