Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 HTR7P1-202ENST00000624664 4411 ntBASIC17.35■□□□□ 0.37
TNFRSF1BP20333 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 AC090340.1-201ENST00000620778 4980 ntBASIC17.35■□□□□ 0.37
TNFRSF1BP20333 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFRSF1BP20333 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFRSF1BP20333 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.34■□□□□ 0.37
TNFRSF1BP20333 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFRSF1BP20333 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFRSF1BP20333 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFRSF1BP20333 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFRSF1BP20333 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.34■□□□□ 0.37
TNFRSF1BP20333 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.34■□□□□ 0.37
TNFRSF1BP20333 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TNFRSF1BP20333 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFRSF1BP20333 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
TNFRSF1BP20333 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFRSF1BP20333 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.34■□□□□ 0.37
TNFRSF1BP20333 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.34■□□□□ 0.37
TNFRSF1BP20333 KRT16P5-201ENST00000455284 522 ntBASIC17.34■□□□□ 0.37
TNFRSF1BP20333 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TNFRSF1BP20333 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.34■□□□□ 0.37
TNFRSF1BP20333 KRT8P32-201ENST00000512863 1461 ntBASIC17.34■□□□□ 0.37
TNFRSF1BP20333 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.34■□□□□ 0.37
TNFRSF1BP20333 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.34■□□□□ 0.37
TNFRSF1BP20333 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.34■□□□□ 0.37
TNFRSF1BP20333 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.34■□□□□ 0.37
TNFRSF1BP20333 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.34■□□□□ 0.37
TNFRSF1BP20333 AL357033.4-201ENST00000617703 1807 ntBASIC17.34■□□□□ 0.37
TNFRSF1BP20333 AP000997.3-201ENST00000623333 2250 ntBASIC17.34■□□□□ 0.37
TNFRSF1BP20333 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.34■□□□□ 0.37
TNFRSF1BP20333 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFRSF1BP20333 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.34■□□□□ 0.37
TNFRSF1BP20333 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.33■□□□□ 0.37
TNFRSF1BP20333 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TNFRSF1BP20333 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.33■□□□□ 0.37
TNFRSF1BP20333 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.33■□□□□ 0.37
TNFRSF1BP20333 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TNFRSF1BP20333 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TNFRSF1BP20333 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFRSF1BP20333 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFRSF1BP20333 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFRSF1BP20333 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TNFRSF1BP20333 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFRSF1BP20333 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFRSF1BP20333 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TNFRSF1BP20333 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFRSF1BP20333 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFRSF1BP20333 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.33■□□□□ 0.36
TNFRSF1BP20333 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFRSF1BP20333 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFRSF1BP20333 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFRSF1BP20333 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.33■□□□□ 0.36
TNFRSF1BP20333 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFRSF1BP20333 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFRSF1BP20333 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.33■□□□□ 0.36
TNFRSF1BP20333 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFRSF1BP20333 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TNFRSF1BP20333 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TNFRSF1BP20333 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFRSF1BP20333 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TNFRSF1BP20333 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.32■□□□□ 0.36
TNFRSF1BP20333 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFRSF1BP20333 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.32■□□□□ 0.36
TNFRSF1BP20333 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TNFRSF1BP20333 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFRSF1BP20333 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TNFRSF1BP20333 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.32■□□□□ 0.36
TNFRSF1BP20333 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.32■□□□□ 0.36
TNFRSF1BP20333 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFRSF1BP20333 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFRSF1BP20333 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
TNFRSF1BP20333 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TNFRSF1BP20333 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.32■□□□□ 0.36
TNFRSF1BP20333 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TNFRSF1BP20333 AC004980.1-204ENST00000429707 299 ntBASIC17.32■□□□□ 0.36
TNFRSF1BP20333 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.32■□□□□ 0.36
TNFRSF1BP20333 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms