Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC175P0C221 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC175P0C221 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC175P0C221 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC175P0C221 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CCDC175P0C221 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC175P0C221 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC175P0C221 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC175P0C221 MIPEPP3-201ENST00000412105 444 ntBASIC20.15■□□□□ 0.82
CCDC175P0C221 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.15■□□□□ 0.82
CCDC175P0C221 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC175P0C221 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC175P0C221 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC175P0C221 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.15■□□□□ 0.82
CCDC175P0C221 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.15■□□□□ 0.82
CCDC175P0C221 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC175P0C221 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC175P0C221 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC175P0C221 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CCDC175P0C221 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.15■□□□□ 0.82
CCDC175P0C221 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC175P0C221 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CCDC175P0C221 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC175P0C221 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC175P0C221 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
CCDC175P0C221 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CCDC175P0C221 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CCDC175P0C221 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
CCDC175P0C221 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC175P0C221 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC175P0C221 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CCDC175P0C221 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC175P0C221 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.15■□□□□ 0.82
CCDC175P0C221 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC175P0C221 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
CCDC175P0C221 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC175P0C221 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.82
CCDC175P0C221 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC175P0C221 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CCDC175P0C221 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC175P0C221 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
CCDC175P0C221 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
CCDC175P0C221 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
CCDC175P0C221 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CCDC175P0C221 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC175P0C221 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
CCDC175P0C221 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CCDC175P0C221 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CCDC175P0C221 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC175P0C221 AC112777.1-201ENST00000540175 1423 ntBASIC20.14■□□□□ 0.81
CCDC175P0C221 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC175P0C221 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC175P0C221 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
CCDC175P0C221 AC091874.3-201ENST00000512672 1195 ntBASIC20.14■□□□□ 0.81
CCDC175P0C221 AC120498.8-201ENST00000614275 531 ntBASIC20.14■□□□□ 0.81
CCDC175P0C221 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC175P0C221 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CCDC175P0C221 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC175P0C221 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC175P0C221 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CCDC175P0C221 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC175P0C221 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC175P0C221 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC175P0C221 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.13■□□□□ 0.81
CCDC175P0C221 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC175P0C221 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
CCDC175P0C221 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC175P0C221 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC175P0C221 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.13■□□□□ 0.81
CCDC175P0C221 AC012313.1-201ENST00000593393 3059 ntBASIC20.13■□□□□ 0.81
CCDC175P0C221 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC175P0C221 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC175P0C221 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC175P0C221 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.13■□□□□ 0.81
CCDC175P0C221 RARRES2P6-201ENST00000567333 442 ntBASIC20.13■□□□□ 0.81
CCDC175P0C221 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.13■□□□□ 0.81
CCDC175P0C221 AC092118.2-201ENST00000613495 667 ntBASIC20.13■□□□□ 0.81
CCDC175P0C221 HLA-B-256ENST00000639848 1089 ntBASIC20.13■□□□□ 0.81
CCDC175P0C221 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC175P0C221 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC175P0C221 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC175P0C221 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC175P0C221 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC175P0C221 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC175P0C221 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC175P0C221 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC175P0C221 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC175P0C221 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC175P0C221 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC175P0C221 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC175P0C221 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC175P0C221 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC175P0C221 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CCDC175P0C221 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
CCDC175P0C221 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC175P0C221 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC175P0C221 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.12■□□□□ 0.81
CCDC175P0C221 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC175P0C221 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC175P0C221 HLA-A-209ENST00000638375 975 ntBASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms