Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOXC6P09630 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOXC6P09630 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HOXC6P09630 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.06■□□□□ 0.96
HOXC6P09630 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HOXC6P09630 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.06■□□□□ 0.96
HOXC6P09630 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOXC6P09630 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.06■□□□□ 0.96
HOXC6P09630 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOXC6P09630 TEX30-205ENST00000376029 959 ntTSL 2 BASIC21.06■□□□□ 0.96
HOXC6P09630 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.06■□□□□ 0.96
HOXC6P09630 SAPCD2P3-201ENST00000455031 850 ntBASIC21.06■□□□□ 0.96
HOXC6P09630 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.06■□□□□ 0.96
HOXC6P09630 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.06■□□□□ 0.96
HOXC6P09630 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.06■□□□□ 0.96
HOXC6P09630 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.06■□□□□ 0.96
HOXC6P09630 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HOXC6P09630 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC21.06■□□□□ 0.96
HOXC6P09630 AP005901.3-202ENST00000581653 237 ntBASIC21.06■□□□□ 0.96
HOXC6P09630 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.06■□□□□ 0.96
HOXC6P09630 AL671883.3-201ENST00000603274 991 ntBASIC21.06■□□□□ 0.96
HOXC6P09630 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HOXC6P09630 AC124864.1-201ENST00000623408 392 ntBASIC21.06■□□□□ 0.96
HOXC6P09630 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOXC6P09630 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.06■□□□□ 0.96
HOXC6P09630 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.06■□□□□ 0.96
HOXC6P09630 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOXC6P09630 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.06■□□□□ 0.96
HOXC6P09630 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.05■□□□□ 0.96
HOXC6P09630 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.05■□□□□ 0.96
HOXC6P09630 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC6P09630 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
HOXC6P09630 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC6P09630 NSUN5P1-202ENST00000421140 1535 ntBASIC21.05■□□□□ 0.96
HOXC6P09630 NSUN5P2-203ENST00000457352 1529 ntBASIC21.05■□□□□ 0.96
HOXC6P09630 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC6P09630 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC6P09630 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC6P09630 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC6P09630 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.05■□□□□ 0.96
HOXC6P09630 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC6P09630 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC6P09630 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC6P09630 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC6P09630 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC6P09630 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC6P09630 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC6P09630 TSPY12P-201ENST00000421279 868 ntBASIC21.05■□□□□ 0.96
HOXC6P09630 AC079776.4-201ENST00000511039 504 ntBASIC21.05■□□□□ 0.96
HOXC6P09630 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
HOXC6P09630 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.05■□□□□ 0.96
HOXC6P09630 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
HOXC6P09630 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.05■□□□□ 0.96
HOXC6P09630 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
HOXC6P09630 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC6P09630 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC6P09630 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC6P09630 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC6P09630 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC6P09630 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.04■□□□□ 0.96
HOXC6P09630 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.04■□□□□ 0.96
HOXC6P09630 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC6P09630 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
HOXC6P09630 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC6P09630 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC6P09630 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HOXC6P09630 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.04■□□□□ 0.96
HOXC6P09630 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC21.04■□□□□ 0.96
HOXC6P09630 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.04■□□□□ 0.96
HOXC6P09630 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.04■□□□□ 0.96
HOXC6P09630 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.04■□□□□ 0.96
HOXC6P09630 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HOXC6P09630 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC6P09630 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.04■□□□□ 0.96
HOXC6P09630 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.04■□□□□ 0.96
HOXC6P09630 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC6P09630 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC6P09630 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC6P09630 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HOXC6P09630 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC6P09630 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
HOXC6P09630 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HOXC6P09630 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HOXC6P09630 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HOXC6P09630 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXC6P09630 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXC6P09630 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXC6P09630 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.03■□□□□ 0.96
HOXC6P09630 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXC6P09630 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
HOXC6P09630 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXC6P09630 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXC6P09630 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.03■□□□□ 0.96
HOXC6P09630 VENTXP7-201ENST00000475503 772 ntBASIC21.03■□□□□ 0.96
HOXC6P09630 RNA5SP419-201ENST00000515908 135 ntBASIC21.03■□□□□ 0.96
HOXC6P09630 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HOXC6P09630 AF238378.1-201ENST00000526806 358 ntBASIC21.03■□□□□ 0.96
HOXC6P09630 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21.03■□□□□ 0.96
HOXC6P09630 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.03■□□□□ 0.96
HOXC6P09630 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms