Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MT-ND1P03886 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-ND1P03886 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MT-ND1P03886 AL162741.1-201ENST00000565563 1558 ntBASIC17.61■□□□□ 0.41
MT-ND1P03886 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.61■□□□□ 0.41
MT-ND1P03886 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
MT-ND1P03886 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MT-ND1P03886 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.61■□□□□ 0.41
MT-ND1P03886 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.61■□□□□ 0.41
MT-ND1P03886 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-ND1P03886 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-ND1P03886 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-ND1P03886 LINC00896-202ENST00000609602 2128 ntBASIC17.6■□□□□ 0.41
MT-ND1P03886 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
MT-ND1P03886 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-ND1P03886 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.6■□□□□ 0.41
MT-ND1P03886 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
MT-ND1P03886 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-ND1P03886 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-ND1P03886 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-ND1P03886 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-ND1P03886 AC069152.1-201ENST00000438030 544 ntBASIC17.6■□□□□ 0.41
MT-ND1P03886 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.6■□□□□ 0.41
MT-ND1P03886 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.6■□□□□ 0.41
MT-ND1P03886 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.6■□□□□ 0.41
MT-ND1P03886 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.6■□□□□ 0.41
MT-ND1P03886 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.6■□□□□ 0.41
MT-ND1P03886 AC092666.2-201ENST00000613287 246 ntBASIC17.6■□□□□ 0.41
MT-ND1P03886 AL121829.2-201ENST00000620908 328 ntBASIC17.6■□□□□ 0.41
MT-ND1P03886 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
MT-ND1P03886 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MT-ND1P03886 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-ND1P03886 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-ND1P03886 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-ND1P03886 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
MT-ND1P03886 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-ND1P03886 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.6■□□□□ 0.41
MT-ND1P03886 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MT-ND1P03886 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND1P03886 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND1P03886 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.59■□□□□ 0.41
MT-ND1P03886 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
MT-ND1P03886 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
MT-ND1P03886 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND1P03886 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND1P03886 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
MT-ND1P03886 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND1P03886 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND1P03886 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND1P03886 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.59■□□□□ 0.41
MT-ND1P03886 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND1P03886 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND1P03886 TUBB8P6-201ENST00000436895 1288 ntBASIC17.59■□□□□ 0.41
MT-ND1P03886 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND1P03886 SOX15-203ENST00000570788 1093 ntBASIC17.59■□□□□ 0.41
MT-ND1P03886 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.59■□□□□ 0.41
MT-ND1P03886 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.59■□□□□ 0.41
MT-ND1P03886 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
MT-ND1P03886 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND1P03886 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND1P03886 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MT-ND1P03886 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.59■□□□□ 0.41
MT-ND1P03886 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MT-ND1P03886 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.58■□□□□ 0.41
MT-ND1P03886 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MT-ND1P03886 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.58■□□□□ 0.41
MT-ND1P03886 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.58■□□□□ 0.41
MT-ND1P03886 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MT-ND1P03886 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MT-ND1P03886 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.58■□□□□ 0.41
MT-ND1P03886 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
MT-ND1P03886 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
MT-ND1P03886 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
MT-ND1P03886 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.58■□□□□ 0.4
MT-ND1P03886 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
MT-ND1P03886 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.58■□□□□ 0.4
MT-ND1P03886 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.58■□□□□ 0.4
MT-ND1P03886 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
MT-ND1P03886 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.58■□□□□ 0.4
MT-ND1P03886 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.58■□□□□ 0.4
MT-ND1P03886 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
MT-ND1P03886 AC142086.2-201ENST00000569753 217 ntBASIC17.58■□□□□ 0.4
MT-ND1P03886 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.58■□□□□ 0.4
MT-ND1P03886 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
MT-ND1P03886 AC008687.6-201ENST00000596318 630 ntBASIC17.58■□□□□ 0.4
MT-ND1P03886 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.58■□□□□ 0.4
MT-ND1P03886 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
MT-ND1P03886 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MT-ND1P03886 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.58■□□□□ 0.4
MT-ND1P03886 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MT-ND1P03886 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MT-ND1P03886 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.57■□□□□ 0.4
MT-ND1P03886 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.57■□□□□ 0.4
MT-ND1P03886 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
MT-ND1P03886 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MT-ND1P03886 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
MT-ND1P03886 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MT-ND1P03886 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.57■□□□□ 0.4
MT-ND1P03886 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.57■□□□□ 0.4
MT-ND1P03886 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms