Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 AC008556.1-201ENST00000610908 2040 ntBASIC20.6■□□□□ 0.89
CD4P01730 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD4P01730 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD4P01730 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD4P01730 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD4P01730 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD4P01730 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CD4P01730 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.6■□□□□ 0.89
CD4P01730 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.6■□□□□ 0.89
CD4P01730 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
CD4P01730 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.6■□□□□ 0.89
CD4P01730 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.6■□□□□ 0.89
CD4P01730 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CD4P01730 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CD4P01730 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD4P01730 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.6■□□□□ 0.89
CD4P01730 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CD4P01730 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD4P01730 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD4P01730 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD4P01730 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.59■□□□□ 0.89
CD4P01730 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD4P01730 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD4P01730 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.59■□□□□ 0.89
CD4P01730 AKR1C7P-201ENST00000305623 895 ntBASIC20.59■□□□□ 0.89
CD4P01730 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD4P01730 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.59■□□□□ 0.89
CD4P01730 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.59■□□□□ 0.89
CD4P01730 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CD4P01730 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.59■□□□□ 0.89
CD4P01730 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.59■□□□□ 0.89
CD4P01730 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.59■□□□□ 0.89
CD4P01730 AC099336.1-202ENST00000602961 463 ntBASIC20.59■□□□□ 0.89
CD4P01730 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.59■□□□□ 0.89
CD4P01730 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CD4P01730 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD4P01730 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.59■□□□□ 0.89
CD4P01730 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CD4P01730 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD4P01730 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CD4P01730 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CD4P01730 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CD4P01730 RCC2P3-201ENST00000418112 1537 ntBASIC20.58■□□□□ 0.89
CD4P01730 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CD4P01730 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CD4P01730 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CD4P01730 AL512353.2-201ENST00000448759 1962 ntBASIC20.58■□□□□ 0.89
CD4P01730 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.58■□□□□ 0.89
CD4P01730 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CD4P01730 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CD4P01730 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CD4P01730 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.58■□□□□ 0.89
CD4P01730 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CD4P01730 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CD4P01730 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.58■□□□□ 0.89
CD4P01730 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.58■□□□□ 0.89
CD4P01730 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
CD4P01730 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.58■□□□□ 0.89
CD4P01730 Z69720.1-201ENST00000601483 472 ntBASIC20.58■□□□□ 0.89
CD4P01730 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.58■□□□□ 0.89
CD4P01730 BX640515.1-201ENST00000617215 977 ntBASIC20.58■□□□□ 0.89
CD4P01730 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CD4P01730 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.58■□□□□ 0.88
CD4P01730 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CD4P01730 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.58■□□□□ 0.88
CD4P01730 Z82202.1-201ENST00000623446 1880 ntBASIC20.58■□□□□ 0.88
CD4P01730 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CD4P01730 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CD4P01730 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CD4P01730 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.57■□□□□ 0.88
CD4P01730 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.57■□□□□ 0.88
CD4P01730 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD4P01730 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.57■□□□□ 0.88
CD4P01730 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD4P01730 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD4P01730 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.57■□□□□ 0.88
CD4P01730 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.57■□□□□ 0.88
CD4P01730 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.57■□□□□ 0.88
CD4P01730 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD4P01730 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CD4P01730 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CD4P01730 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD4P01730 AP000593.1-201ENST00000393668 712 ntBASIC20.57■□□□□ 0.88
CD4P01730 TSPY12P-201ENST00000421279 868 ntBASIC20.57■□□□□ 0.88
CD4P01730 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.57■□□□□ 0.88
CD4P01730 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.57■□□□□ 0.88
CD4P01730 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD4P01730 GPR32P1-201ENST00000601788 811 ntBASIC20.57■□□□□ 0.88
CD4P01730 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CD4P01730 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CD4P01730 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD4P01730 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.57■□□□□ 0.88
CD4P01730 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD4P01730 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.57■□□□□ 0.88
CD4P01730 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD4P01730 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD4P01730 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.56■□□□□ 0.88
CD4P01730 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CD4P01730 AL158211.5-201ENST00000623583 2518 ntBASIC20.56■□□□□ 0.88
CD4P01730 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms