Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.21■□□□□ 0.35
NKX2-2O95096 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NKX2-2O95096 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NKX2-2O95096 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.21■□□□□ 0.35
NKX2-2O95096 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.21■□□□□ 0.35
NKX2-2O95096 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.21■□□□□ 0.35
NKX2-2O95096 FAM87A-204ENST00000613235 858 ntBASIC17.21■□□□□ 0.35
NKX2-2O95096 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.21■□□□□ 0.35
NKX2-2O95096 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.21■□□□□ 0.35
NKX2-2O95096 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.21■□□□□ 0.35
NKX2-2O95096 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.21■□□□□ 0.35
NKX2-2O95096 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NKX2-2O95096 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
NKX2-2O95096 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NKX2-2O95096 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NKX2-2O95096 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NKX2-2O95096 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NKX2-2O95096 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NKX2-2O95096 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NKX2-2O95096 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NKX2-2O95096 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
NKX2-2O95096 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
NKX2-2O95096 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NKX2-2O95096 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.2■□□□□ 0.34
NKX2-2O95096 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NKX2-2O95096 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NKX2-2O95096 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NKX2-2O95096 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NKX2-2O95096 LINC01568-207ENST00000641790 1380 ntBASIC17.2■□□□□ 0.34
NKX2-2O95096 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NKX2-2O95096 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NKX2-2O95096 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NKX2-2O95096 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NKX2-2O95096 AC087499.1-201ENST00000418141 1075 ntBASIC17.2■□□□□ 0.34
NKX2-2O95096 ECEL1P2-202ENST00000465689 757 ntBASIC17.2■□□□□ 0.34
NKX2-2O95096 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.2■□□□□ 0.34
NKX2-2O95096 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NKX2-2O95096 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.2■□□□□ 0.34
NKX2-2O95096 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NKX2-2O95096 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NKX2-2O95096 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NKX2-2O95096 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NKX2-2O95096 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
NKX2-2O95096 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.2■□□□□ 0.34
NKX2-2O95096 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NKX2-2O95096 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NKX2-2O95096 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NKX2-2O95096 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.19■□□□□ 0.34
NKX2-2O95096 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NKX2-2O95096 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NKX2-2O95096 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
NKX2-2O95096 HMGA1P5-201ENST00000412453 271 ntBASIC17.19■□□□□ 0.34
NKX2-2O95096 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.19■□□□□ 0.34
NKX2-2O95096 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.19■□□□□ 0.34
NKX2-2O95096 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.19■□□□□ 0.34
NKX2-2O95096 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NKX2-2O95096 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
NKX2-2O95096 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.19■□□□□ 0.34
NKX2-2O95096 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.19■□□□□ 0.34
NKX2-2O95096 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NKX2-2O95096 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NKX2-2O95096 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NKX2-2O95096 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.19■□□□□ 0.34
NKX2-2O95096 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NKX2-2O95096 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NKX2-2O95096 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
NKX2-2O95096 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NKX2-2O95096 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NKX2-2O95096 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NKX2-2O95096 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.18■□□□□ 0.34
NKX2-2O95096 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NKX2-2O95096 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.18■□□□□ 0.34
NKX2-2O95096 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NKX2-2O95096 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.18■□□□□ 0.34
NKX2-2O95096 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NKX2-2O95096 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.18■□□□□ 0.34
NKX2-2O95096 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
NKX2-2O95096 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NKX2-2O95096 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NKX2-2O95096 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NKX2-2O95096 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NKX2-2O95096 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.18■□□□□ 0.34
NKX2-2O95096 KRT18P23-201ENST00000435622 1283 ntBASIC17.18■□□□□ 0.34
NKX2-2O95096 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.18■□□□□ 0.34
NKX2-2O95096 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
NKX2-2O95096 AL512604.3-201ENST00000569583 964 ntBASIC17.18■□□□□ 0.34
NKX2-2O95096 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.18■□□□□ 0.34
NKX2-2O95096 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NKX2-2O95096 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.18■□□□□ 0.34
NKX2-2O95096 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NKX2-2O95096 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.18■□□□□ 0.34
NKX2-2O95096 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NKX2-2O95096 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NKX2-2O95096 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NKX2-2O95096 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NKX2-2O95096 KRT18P22-201ENST00000402024 1347 ntBASIC17.18■□□□□ 0.34
NKX2-2O95096 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
NKX2-2O95096 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NKX2-2O95096 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NKX2-2O95096 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms