Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTP4A3O75365 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.82■□□□□ 0.28
PTP4A3O75365 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.82■□□□□ 0.28
PTP4A3O75365 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTP4A3O75365 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PTP4A3O75365 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTP4A3O75365 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTP4A3O75365 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.82■□□□□ 0.28
PTP4A3O75365 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTP4A3O75365 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTP4A3O75365 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.82■□□□□ 0.28
PTP4A3O75365 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.82■□□□□ 0.28
PTP4A3O75365 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.81■□□□□ 0.28
PTP4A3O75365 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A3O75365 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PTP4A3O75365 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.81■□□□□ 0.28
PTP4A3O75365 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A3O75365 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.81■□□□□ 0.28
PTP4A3O75365 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A3O75365 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A3O75365 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.81■□□□□ 0.28
PTP4A3O75365 AC008556.1-201ENST00000610908 2040 ntBASIC16.81■□□□□ 0.28
PTP4A3O75365 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A3O75365 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PTP4A3O75365 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A3O75365 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A3O75365 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A3O75365 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A3O75365 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.81■□□□□ 0.28
PTP4A3O75365 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PTP4A3O75365 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A3O75365 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A3O75365 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A3O75365 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A3O75365 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.81■□□□□ 0.28
PTP4A3O75365 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.81■□□□□ 0.28
PTP4A3O75365 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A3O75365 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.81■□□□□ 0.28
PTP4A3O75365 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTP4A3O75365 MYLKP1-201ENST00000509077 1580 ntBASIC16.81■□□□□ 0.28
PTP4A3O75365 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PTP4A3O75365 FSCN1P1-201ENST00000568912 1481 ntBASIC16.8■□□□□ 0.28
PTP4A3O75365 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
PTP4A3O75365 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.8■□□□□ 0.28
PTP4A3O75365 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.8■□□□□ 0.28
PTP4A3O75365 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTP4A3O75365 AC093677.2-201ENST00000600169 1863 ntBASIC16.8■□□□□ 0.28
PTP4A3O75365 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTP4A3O75365 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.8■□□□□ 0.28
PTP4A3O75365 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTP4A3O75365 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.8■□□□□ 0.28
PTP4A3O75365 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTP4A3O75365 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.8■□□□□ 0.28
PTP4A3O75365 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTP4A3O75365 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.8■□□□□ 0.28
PTP4A3O75365 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.8■□□□□ 0.28
PTP4A3O75365 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.8■□□□□ 0.28
PTP4A3O75365 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.8■□□□□ 0.28
PTP4A3O75365 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.8■□□□□ 0.28
PTP4A3O75365 AL359736.2-201ENST00000621992 437 ntBASIC16.8■□□□□ 0.28
PTP4A3O75365 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.8■□□□□ 0.28
PTP4A3O75365 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.8■□□□□ 0.28
PTP4A3O75365 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PTP4A3O75365 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PTP4A3O75365 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTP4A3O75365 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTP4A3O75365 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTP4A3O75365 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTP4A3O75365 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTP4A3O75365 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTP4A3O75365 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTP4A3O75365 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTP4A3O75365 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTP4A3O75365 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.79■□□□□ 0.28
PTP4A3O75365 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTP4A3O75365 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTP4A3O75365 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.79■□□□□ 0.28
PTP4A3O75365 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTP4A3O75365 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PTP4A3O75365 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.79■□□□□ 0.28
PTP4A3O75365 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
PTP4A3O75365 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTP4A3O75365 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
PTP4A3O75365 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTP4A3O75365 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
PTP4A3O75365 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.79■□□□□ 0.28
PTP4A3O75365 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTP4A3O75365 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.79■□□□□ 0.28
PTP4A3O75365 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTP4A3O75365 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.79■□□□□ 0.28
PTP4A3O75365 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.79■□□□□ 0.28
PTP4A3O75365 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTP4A3O75365 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTP4A3O75365 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTP4A3O75365 AC106820.2-201ENST00000563775 3264 ntBASIC16.78■□□□□ 0.28
PTP4A3O75365 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.78■□□□□ 0.28
PTP4A3O75365 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.78■□□□□ 0.28
PTP4A3O75365 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PTP4A3O75365 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTP4A3O75365 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms