Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.98■□□□□ 0.95
CHMP2AO43633 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
CHMP2AO43633 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP2AO43633 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP2AO43633 AC087289.5-201ENST00000586076 3175 ntBASIC20.97■□□□□ 0.95
CHMP2AO43633 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.97■□□□□ 0.95
CHMP2AO43633 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CHMP2AO43633 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP2AO43633 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP2AO43633 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP2AO43633 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CHMP2AO43633 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP2AO43633 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.97■□□□□ 0.95
CHMP2AO43633 AC087388.1-201ENST00000571370 1112 ntBASIC20.97■□□□□ 0.95
CHMP2AO43633 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.97■□□□□ 0.95
CHMP2AO43633 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
CHMP2AO43633 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP2AO43633 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP2AO43633 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP2AO43633 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
CHMP2AO43633 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
CHMP2AO43633 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP2AO43633 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP2AO43633 Z98044.1-201ENST00000632503 1764 ntBASIC20.97■□□□□ 0.95
CHMP2AO43633 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.97■□□□□ 0.95
CHMP2AO43633 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP2AO43633 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.97■□□□□ 0.95
CHMP2AO43633 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP2AO43633 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP2AO43633 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP2AO43633 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP2AO43633 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.96■□□□□ 0.95
CHMP2AO43633 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.96■□□□□ 0.95
CHMP2AO43633 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP2AO43633 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP2AO43633 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.96■□□□□ 0.95
CHMP2AO43633 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP2AO43633 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CHMP2AO43633 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.96■□□□□ 0.95
CHMP2AO43633 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP2AO43633 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CHMP2AO43633 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP2AO43633 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP2AO43633 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP2AO43633 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.96■□□□□ 0.95
CHMP2AO43633 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CHMP2AO43633 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.95■□□□□ 0.95
CHMP2AO43633 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
CHMP2AO43633 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.95■□□□□ 0.94
CHMP2AO43633 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP2AO43633 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP2AO43633 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.95■□□□□ 0.94
CHMP2AO43633 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP2AO43633 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP2AO43633 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.95■□□□□ 0.94
CHMP2AO43633 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP2AO43633 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP2AO43633 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.95■□□□□ 0.94
CHMP2AO43633 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.95■□□□□ 0.94
CHMP2AO43633 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP2AO43633 FAM8A6P-201ENST00000407496 1135 ntBASIC20.95■□□□□ 0.94
CHMP2AO43633 SPDYE15P-201ENST00000424157 909 ntBASIC20.95■□□□□ 0.94
CHMP2AO43633 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.95■□□□□ 0.94
CHMP2AO43633 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.95■□□□□ 0.94
CHMP2AO43633 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.95■□□□□ 0.94
CHMP2AO43633 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CHMP2AO43633 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.95■□□□□ 0.94
CHMP2AO43633 LINC01238-205ENST00000567549 1107 ntBASIC20.95■□□□□ 0.94
CHMP2AO43633 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.95■□□□□ 0.94
CHMP2AO43633 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP2AO43633 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP2AO43633 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.95■□□□□ 0.94
CHMP2AO43633 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.95■□□□□ 0.94
CHMP2AO43633 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CHMP2AO43633 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP2AO43633 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP2AO43633 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP2AO43633 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP2AO43633 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2AO43633 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2AO43633 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2AO43633 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2AO43633 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2AO43633 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.94■□□□□ 0.94
CHMP2AO43633 AC034236.2-201ENST00000606662 1610 ntBASIC20.94■□□□□ 0.94
CHMP2AO43633 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2AO43633 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2AO43633 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2AO43633 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2AO43633 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2AO43633 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2AO43633 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2AO43633 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2AO43633 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.94■□□□□ 0.94
CHMP2AO43633 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.94■□□□□ 0.94
CHMP2AO43633 SEC1P-202ENST00000473944 940 ntBASIC20.94■□□□□ 0.94
CHMP2AO43633 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.94■□□□□ 0.94
CHMP2AO43633 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.94■□□□□ 0.94
CHMP2AO43633 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.94■□□□□ 0.94
CHMP2AO43633 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms