Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 REXO1L12P-201ENST00000622156 912 ntBASIC13.35□□□□□ -0.27
PAX4O43316 AC066615.1-201ENST00000640911 628 ntBASIC13.35□□□□□ -0.27
PAX4O43316 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.35□□□□□ -0.27
PAX4O43316 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PAX4O43316 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PAX4O43316 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PAX4O43316 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
PAX4O43316 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC13.35□□□□□ -0.27
PAX4O43316 TNXA-203ENST00000507684 2038 ntBASIC13.35□□□□□ -0.27
PAX4O43316 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
PAX4O43316 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
PAX4O43316 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC13.35□□□□□ -0.27
PAX4O43316 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PAX4O43316 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PAX4O43316 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PAX4O43316 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC13.35□□□□□ -0.27
PAX4O43316 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC13.35□□□□□ -0.27
PAX4O43316 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PAX4O43316 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PAX4O43316 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
PAX4O43316 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PAX4O43316 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
PAX4O43316 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PAX4O43316 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
PAX4O43316 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PAX4O43316 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PAX4O43316 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PAX4O43316 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PAX4O43316 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PAX4O43316 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC13.34□□□□□ -0.27
PAX4O43316 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
PAX4O43316 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PAX4O43316 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC13.34□□□□□ -0.27
PAX4O43316 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
PAX4O43316 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PAX4O43316 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PAX4O43316 AC008040.2-201ENST00000461049 708 ntBASIC13.34□□□□□ -0.27
PAX4O43316 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PAX4O43316 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.34□□□□□ -0.27
PAX4O43316 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC13.34□□□□□ -0.27
PAX4O43316 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC13.34□□□□□ -0.27
PAX4O43316 MIR4497-201ENST00000583208 89 ntBASIC13.34□□□□□ -0.27
PAX4O43316 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC13.34□□□□□ -0.27
PAX4O43316 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PAX4O43316 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
PAX4O43316 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
PAX4O43316 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.34□□□□□ -0.27
PAX4O43316 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
PAX4O43316 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PAX4O43316 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC13.34□□□□□ -0.27
PAX4O43316 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PAX4O43316 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PAX4O43316 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC13.34□□□□□ -0.27
PAX4O43316 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PAX4O43316 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
PAX4O43316 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.33□□□□□ -0.27
PAX4O43316 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
PAX4O43316 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PAX4O43316 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PAX4O43316 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PAX4O43316 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
PAX4O43316 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PAX4O43316 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PAX4O43316 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
PAX4O43316 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PAX4O43316 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.33□□□□□ -0.28
PAX4O43316 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PAX4O43316 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PAX4O43316 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13.33□□□□□ -0.28
PAX4O43316 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PAX4O43316 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PAX4O43316 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PAX4O43316 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PAX4O43316 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PAX4O43316 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PAX4O43316 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PAX4O43316 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC13.33□□□□□ -0.28
PAX4O43316 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
PAX4O43316 MESTP1-201ENST00000404287 994 ntBASIC13.33□□□□□ -0.28
PAX4O43316 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PAX4O43316 CRYGFP-201ENST00000418459 633 ntBASIC13.33□□□□□ -0.28
PAX4O43316 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC13.33□□□□□ -0.28
PAX4O43316 CKBP1-201ENST00000565489 1086 ntBASIC13.33□□□□□ -0.28
PAX4O43316 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC13.33□□□□□ -0.28
PAX4O43316 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.33□□□□□ -0.28
PAX4O43316 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PAX4O43316 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
PAX4O43316 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
PAX4O43316 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC13.33□□□□□ -0.28
PAX4O43316 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PAX4O43316 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC13.33□□□□□ -0.28
PAX4O43316 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PAX4O43316 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PAX4O43316 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.33□□□□□ -0.28
PAX4O43316 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PAX4O43316 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PAX4O43316 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PAX4O43316 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PAX4O43316 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PAX4O43316 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms