Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
IFRD1O00458 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.43■□□□□ 0.54
IFRD1O00458 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.43■□□□□ 0.54
IFRD1O00458 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
IFRD1O00458 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.43■□□□□ 0.54
IFRD1O00458 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IFRD1O00458 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IFRD1O00458 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.42■□□□□ 0.54
IFRD1O00458 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.42■□□□□ 0.54
IFRD1O00458 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.42■□□□□ 0.54
IFRD1O00458 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.42■□□□□ 0.54
IFRD1O00458 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
IFRD1O00458 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 INGX-201ENST00000359239 846 ntBASIC18.42■□□□□ 0.54
IFRD1O00458 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 SLC25A3P1-201ENST00000443844 931 ntBASIC18.42■□□□□ 0.54
IFRD1O00458 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.42■□□□□ 0.54
IFRD1O00458 ATP5G1P1-201ENST00000448724 379 ntBASIC18.42■□□□□ 0.54
IFRD1O00458 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.42■□□□□ 0.54
IFRD1O00458 FAM87A-204ENST00000613235 858 ntBASIC18.42■□□□□ 0.54
IFRD1O00458 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
IFRD1O00458 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
IFRD1O00458 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
IFRD1O00458 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
IFRD1O00458 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
IFRD1O00458 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
IFRD1O00458 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.42■□□□□ 0.54
IFRD1O00458 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.42■□□□□ 0.54
IFRD1O00458 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFRD1O00458 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
IFRD1O00458 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
IFRD1O00458 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IFRD1O00458 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.41■□□□□ 0.54
IFRD1O00458 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IFRD1O00458 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.41■□□□□ 0.54
IFRD1O00458 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
IFRD1O00458 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IFRD1O00458 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IFRD1O00458 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IFRD1O00458 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.41■□□□□ 0.54
IFRD1O00458 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
IFRD1O00458 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.41■□□□□ 0.54
IFRD1O00458 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
IFRD1O00458 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.41■□□□□ 0.54
IFRD1O00458 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.41■□□□□ 0.54
IFRD1O00458 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
IFRD1O00458 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IFRD1O00458 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
IFRD1O00458 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
IFRD1O00458 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.41■□□□□ 0.54
IFRD1O00458 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IFRD1O00458 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
IFRD1O00458 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.41■□□□□ 0.54
IFRD1O00458 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
IFRD1O00458 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IFRD1O00458 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
IFRD1O00458 AL512353.2-201ENST00000448759 1962 ntBASIC18.41■□□□□ 0.54
IFRD1O00458 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
IFRD1O00458 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFRD1O00458 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFRD1O00458 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
IFRD1O00458 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFRD1O00458 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFRD1O00458 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
IFRD1O00458 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFRD1O00458 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFRD1O00458 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
IFRD1O00458 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFRD1O00458 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFRD1O00458 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
IFRD1O00458 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFRD1O00458 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
IFRD1O00458 AC113347.1-201ENST00000413321 391 ntBASIC18.4■□□□□ 0.54
IFRD1O00458 AL137013.1-201ENST00000432946 1228 ntBASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms