Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PDLIM1O00151 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PDLIM1O00151 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM1O00151 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM1O00151 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.76■□□□□ 0.43
PDLIM1O00151 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PDLIM1O00151 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM1O00151 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM1O00151 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM1O00151 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM1O00151 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM1O00151 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM1O00151 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM1O00151 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM1O00151 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM1O00151 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.75■□□□□ 0.43
PDLIM1O00151 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PDLIM1O00151 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM1O00151 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM1O00151 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM1O00151 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM1O00151 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PDLIM1O00151 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
PDLIM1O00151 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM1O00151 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.75■□□□□ 0.43
PDLIM1O00151 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM1O00151 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PDLIM1O00151 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM1O00151 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM1O00151 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.75■□□□□ 0.43
PDLIM1O00151 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.75■□□□□ 0.43
PDLIM1O00151 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.75■□□□□ 0.43
PDLIM1O00151 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM1O00151 PNMA6B-201ENST00000538162 1200 ntBASIC17.75■□□□□ 0.43
PDLIM1O00151 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM1O00151 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
PDLIM1O00151 MIR4651-201ENST00000582622 73 ntBASIC17.75■□□□□ 0.43
PDLIM1O00151 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM1O00151 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM1O00151 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM1O00151 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM1O00151 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM1O00151 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.75■□□□□ 0.43
PDLIM1O00151 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PDLIM1O00151 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM1O00151 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM1O00151 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PDLIM1O00151 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM1O00151 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.74■□□□□ 0.43
PDLIM1O00151 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.74■□□□□ 0.43
PDLIM1O00151 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM1O00151 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM1O00151 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM1O00151 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM1O00151 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM1O00151 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.74■□□□□ 0.43
PDLIM1O00151 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.74■□□□□ 0.43
PDLIM1O00151 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.74■□□□□ 0.43
PDLIM1O00151 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM1O00151 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.74■□□□□ 0.43
PDLIM1O00151 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PDLIM1O00151 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.74■□□□□ 0.43
PDLIM1O00151 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM1O00151 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM1O00151 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PDLIM1O00151 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PDLIM1O00151 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.74■□□□□ 0.43
PDLIM1O00151 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.74■□□□□ 0.43
PDLIM1O00151 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM1O00151 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM1O00151 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM1O00151 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM1O00151 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PDLIM1O00151 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PDLIM1O00151 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM1O00151 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.74■□□□□ 0.43
PDLIM1O00151 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PDLIM1O00151 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM1O00151 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM1O00151 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
PDLIM1O00151 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.73■□□□□ 0.43
PDLIM1O00151 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.73■□□□□ 0.43
PDLIM1O00151 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM1O00151 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM1O00151 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM1O00151 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM1O00151 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM1O00151 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.73■□□□□ 0.43
PDLIM1O00151 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM1O00151 FEM1AP3-201ENST00000403722 1741 ntBASIC17.73■□□□□ 0.43
PDLIM1O00151 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
PDLIM1O00151 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM1O00151 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM1O00151 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM1O00151 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM1O00151 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM1O00151 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.73■□□□□ 0.43
PDLIM1O00151 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
PDLIM1O00151 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.73■□□□□ 0.43
PDLIM1O00151 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms