Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYRM9A8MSI8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LYRM9A8MSI8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
LYRM9A8MSI8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LYRM9A8MSI8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC13.32□□□□□ -0.28
LYRM9A8MSI8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 NFYC-AS1-201ENST00000606277 1687 ntBASIC13.31□□□□□ -0.28
LYRM9A8MSI8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 Z98044.1-201ENST00000632503 1764 ntBASIC13.31□□□□□ -0.28
LYRM9A8MSI8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 KRT18P41-201ENST00000518924 1277 ntBASIC13.31□□□□□ -0.28
LYRM9A8MSI8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 AC010203.1-204ENST00000548782 407 ntBASIC13.31□□□□□ -0.28
LYRM9A8MSI8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 AC140113.3-201ENST00000605663 199 ntBASIC13.31□□□□□ -0.28
LYRM9A8MSI8 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 AC112497.1-201ENST00000624824 639 ntBASIC13.31□□□□□ -0.28
LYRM9A8MSI8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 AL357033.4-201ENST00000617703 1807 ntBASIC13.31□□□□□ -0.28
LYRM9A8MSI8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LYRM9A8MSI8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.3□□□□□ -0.28
LYRM9A8MSI8 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 KRT18P23-201ENST00000435622 1283 ntBASIC13.3□□□□□ -0.28
LYRM9A8MSI8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 COX11P1-201ENST00000489116 835 ntBASIC13.3□□□□□ -0.28
LYRM9A8MSI8 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LYRM9A8MSI8 AC073508.3-201ENST00000619697 1419 ntBASIC13.3□□□□□ -0.28
LYRM9A8MSI8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYRM9A8MSI8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.29□□□□□ -0.28
LYRM9A8MSI8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYRM9A8MSI8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LYRM9A8MSI8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
LYRM9A8MSI8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LYRM9A8MSI8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LYRM9A8MSI8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LYRM9A8MSI8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms