Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCA3PQ9Y6N3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.66■□□□□ 0.42
CLCA3PQ9Y6N3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCA3PQ9Y6N3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCA3PQ9Y6N3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCA3PQ9Y6N3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.66■□□□□ 0.42
CLCA3PQ9Y6N3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.66■□□□□ 0.42
CLCA3PQ9Y6N3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.66■□□□□ 0.42
CLCA3PQ9Y6N3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CLCA3PQ9Y6N3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCA3PQ9Y6N3 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.66■□□□□ 0.42
CLCA3PQ9Y6N3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.66■□□□□ 0.42
CLCA3PQ9Y6N3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CLCA3PQ9Y6N3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLCA3PQ9Y6N3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCA3PQ9Y6N3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCA3PQ9Y6N3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLCA3PQ9Y6N3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CLCA3PQ9Y6N3 AC093503.3-201ENST00000624917 2352 ntBASIC17.66■□□□□ 0.42
CLCA3PQ9Y6N3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCA3PQ9Y6N3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCA3PQ9Y6N3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 AP003041.3-201ENST00000527151 707 ntBASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CLCA3PQ9Y6N3 AL161938.1-201ENST00000569833 2180 ntBASIC17.64■□□□□ 0.42
CLCA3PQ9Y6N3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLCA3PQ9Y6N3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
CLCA3PQ9Y6N3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.64■□□□□ 0.42
CLCA3PQ9Y6N3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCA3PQ9Y6N3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CLCA3PQ9Y6N3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLCA3PQ9Y6N3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
CLCA3PQ9Y6N3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCA3PQ9Y6N3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLCA3PQ9Y6N3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLCA3PQ9Y6N3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.64■□□□□ 0.41
CLCA3PQ9Y6N3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCA3PQ9Y6N3 INGX-201ENST00000359239 846 ntBASIC17.64■□□□□ 0.41
CLCA3PQ9Y6N3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLCA3PQ9Y6N3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CLCA3PQ9Y6N3 HMGA1P5-201ENST00000412453 271 ntBASIC17.64■□□□□ 0.41
CLCA3PQ9Y6N3 LIN28AP1-201ENST00000429574 405 ntBASIC17.64■□□□□ 0.41
CLCA3PQ9Y6N3 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.64■□□□□ 0.41
CLCA3PQ9Y6N3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.64■□□□□ 0.41
CLCA3PQ9Y6N3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.64■□□□□ 0.41
CLCA3PQ9Y6N3 AC005332.8-201ENST00000622750 2735 ntBASIC17.64■□□□□ 0.41
CLCA3PQ9Y6N3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCA3PQ9Y6N3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.64■□□□□ 0.41
CLCA3PQ9Y6N3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCA3PQ9Y6N3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCA3PQ9Y6N3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCA3PQ9Y6N3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CLCA3PQ9Y6N3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCA3PQ9Y6N3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CLCA3PQ9Y6N3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.63■□□□□ 0.41
CLCA3PQ9Y6N3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCA3PQ9Y6N3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCA3PQ9Y6N3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.63■□□□□ 0.41
CLCA3PQ9Y6N3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCA3PQ9Y6N3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.63■□□□□ 0.41
CLCA3PQ9Y6N3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLCA3PQ9Y6N3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCA3PQ9Y6N3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCA3PQ9Y6N3 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.63■□□□□ 0.41
CLCA3PQ9Y6N3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCA3PQ9Y6N3 SLC25A3P1-201ENST00000443844 931 ntBASIC17.63■□□□□ 0.41
CLCA3PQ9Y6N3 ATP5G1P1-201ENST00000448724 379 ntBASIC17.63■□□□□ 0.41
CLCA3PQ9Y6N3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.63■□□□□ 0.41
CLCA3PQ9Y6N3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.63■□□□□ 0.41
CLCA3PQ9Y6N3 AL512604.3-201ENST00000569583 964 ntBASIC17.63■□□□□ 0.41
CLCA3PQ9Y6N3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
CLCA3PQ9Y6N3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CLCA3PQ9Y6N3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms