Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 AC060814.1-201ENST00000554326 538 ntBASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 MIR2861-201ENST00000636310 90 ntBASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 AC105020.1-201ENST00000435356 2205 ntBASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS1Q9Y6A9 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 TCAF2P1-201ENST00000291129 2421 ntBASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SPCS1Q9Y6A9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms