Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PCDHGA3Q9Y5H0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
PCDHGA3Q9Y5H0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA3Q9Y5H0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHGA3Q9Y5H0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA3Q9Y5H0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHGA3Q9Y5H0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.14■□□□□ 0.49
PCDHGA3Q9Y5H0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.14■□□□□ 0.49
PCDHGA3Q9Y5H0 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
PCDHGA3Q9Y5H0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.14■□□□□ 0.49
PCDHGA3Q9Y5H0 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.14■□□□□ 0.49
PCDHGA3Q9Y5H0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PCDHGA3Q9Y5H0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
PCDHGA3Q9Y5H0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
PCDHGA3Q9Y5H0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
PCDHGA3Q9Y5H0 AC005332.1-201ENST00000577698 1310 ntBASIC18.14■□□□□ 0.49
PCDHGA3Q9Y5H0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PCDHGA3Q9Y5H0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PCDHGA3Q9Y5H0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA3Q9Y5H0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA3Q9Y5H0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA3Q9Y5H0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA3Q9Y5H0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHGA3Q9Y5H0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA3Q9Y5H0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 STARP1-201ENST00000397973 869 ntBASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 KRT18P38-201ENST00000449496 1282 ntBASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 KRT126P-201ENST00000549467 1181 ntBASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 AL691432.2-201ENST00000607222 2038 ntBASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGA3Q9Y5H0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA3Q9Y5H0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA3Q9Y5H0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA3Q9Y5H0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGA3Q9Y5H0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHGA3Q9Y5H0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA3Q9Y5H0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGA3Q9Y5H0 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHGA3Q9Y5H0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHGA3Q9Y5H0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGA3Q9Y5H0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA3Q9Y5H0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA3Q9Y5H0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.12■□□□□ 0.49
PCDHGA3Q9Y5H0 KRT18P48-201ENST00000434763 852 ntBASIC18.12■□□□□ 0.49
PCDHGA3Q9Y5H0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA3Q9Y5H0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDHGA3Q9Y5H0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHGA3Q9Y5H0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PCDHGA3Q9Y5H0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA3Q9Y5H0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGA3Q9Y5H0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGA3Q9Y5H0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDHGA3Q9Y5H0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHGA3Q9Y5H0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA3Q9Y5H0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA3Q9Y5H0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA3Q9Y5H0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHGA3Q9Y5H0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA3Q9Y5H0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA3Q9Y5H0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA3Q9Y5H0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PCDHGA3Q9Y5H0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGA3Q9Y5H0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA3Q9Y5H0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PCDHGA3Q9Y5H0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHGA3Q9Y5H0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGA3Q9Y5H0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHGA3Q9Y5H0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHGA3Q9Y5H0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGA3Q9Y5H0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA3Q9Y5H0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA3Q9Y5H0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA3Q9Y5H0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.11■□□□□ 0.49
PCDHGA3Q9Y5H0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA3Q9Y5H0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA3Q9Y5H0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PCDHGA3Q9Y5H0 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms