Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 AC006058.3-201ENST00000606217 1069 ntBASIC21.96■■□□□ 1.11
SMC3Q9UQE7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.96■■□□□ 1.11
SMC3Q9UQE7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMC3Q9UQE7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SMC3Q9UQE7 LETM1P2-201ENST00000597330 2178 ntBASIC21.96■■□□□ 1.11
SMC3Q9UQE7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMC3Q9UQE7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMC3Q9UQE7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMC3Q9UQE7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.96■■□□□ 1.11
SMC3Q9UQE7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMC3Q9UQE7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SMC3Q9UQE7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.96■■□□□ 1.11
SMC3Q9UQE7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.96■■□□□ 1.11
SMC3Q9UQE7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMC3Q9UQE7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
SMC3Q9UQE7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMC3Q9UQE7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
SMC3Q9UQE7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMC3Q9UQE7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMC3Q9UQE7 KSR1P1-201ENST00000446298 240 ntBASIC21.95■■□□□ 1.1
SMC3Q9UQE7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.95■■□□□ 1.1
SMC3Q9UQE7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.95■■□□□ 1.1
SMC3Q9UQE7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
SMC3Q9UQE7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
SMC3Q9UQE7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.95■■□□□ 1.1
SMC3Q9UQE7 AL353708.3-201ENST00000610272 989 ntBASIC21.95■■□□□ 1.1
SMC3Q9UQE7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMC3Q9UQE7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMC3Q9UQE7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMC3Q9UQE7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMC3Q9UQE7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SMC3Q9UQE7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SMC3Q9UQE7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
SMC3Q9UQE7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMC3Q9UQE7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.94■■□□□ 1.1
SMC3Q9UQE7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMC3Q9UQE7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMC3Q9UQE7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
SMC3Q9UQE7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.94■■□□□ 1.1
SMC3Q9UQE7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.94■■□□□ 1.1
SMC3Q9UQE7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SMC3Q9UQE7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMC3Q9UQE7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.94■■□□□ 1.1
SMC3Q9UQE7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.94■■□□□ 1.1
SMC3Q9UQE7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.94■■□□□ 1.1
SMC3Q9UQE7 AC004951.3-201ENST00000418645 1148 ntBASIC21.94■■□□□ 1.1
SMC3Q9UQE7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SMC3Q9UQE7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMC3Q9UQE7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMC3Q9UQE7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.94■■□□□ 1.1
SMC3Q9UQE7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
SMC3Q9UQE7 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.94■■□□□ 1.1
SMC3Q9UQE7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
SMC3Q9UQE7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.94■■□□□ 1.1
SMC3Q9UQE7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMC3Q9UQE7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.94■■□□□ 1.1
SMC3Q9UQE7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.94■■□□□ 1.1
SMC3Q9UQE7 AL162741.1-201ENST00000565563 1558 ntBASIC21.94■■□□□ 1.1
SMC3Q9UQE7 AL357033.4-201ENST00000617703 1807 ntBASIC21.94■■□□□ 1.1
SMC3Q9UQE7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMC3Q9UQE7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMC3Q9UQE7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.94■■□□□ 1.1
SMC3Q9UQE7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.94■■□□□ 1.1
SMC3Q9UQE7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMC3Q9UQE7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMC3Q9UQE7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
SMC3Q9UQE7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMC3Q9UQE7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMC3Q9UQE7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMC3Q9UQE7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMC3Q9UQE7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMC3Q9UQE7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.93■■□□□ 1.1
SMC3Q9UQE7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMC3Q9UQE7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.93■■□□□ 1.1
SMC3Q9UQE7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMC3Q9UQE7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMC3Q9UQE7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.93■■□□□ 1.1
SMC3Q9UQE7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.93■■□□□ 1.1
SMC3Q9UQE7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMC3Q9UQE7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMC3Q9UQE7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
SMC3Q9UQE7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMC3Q9UQE7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.93■■□□□ 1.1
SMC3Q9UQE7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.93■■□□□ 1.1
SMC3Q9UQE7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.93■■□□□ 1.1
SMC3Q9UQE7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
SMC3Q9UQE7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
SMC3Q9UQE7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMC3Q9UQE7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMC3Q9UQE7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.93■■□□□ 1.1
SMC3Q9UQE7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMC3Q9UQE7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SMC3Q9UQE7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMC3Q9UQE7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMC3Q9UQE7 NOC2LP2-201ENST00000407594 1944 ntBASIC21.92■■□□□ 1.1
SMC3Q9UQE7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.92■■□□□ 1.1
SMC3Q9UQE7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SMC3Q9UQE7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMC3Q9UQE7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMC3Q9UQE7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms