Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COPS3Q9UNS2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 POU5F1P3-201ENST00000428824 1078 ntBASIC16.66■□□□□ 0.26
COPS3Q9UNS2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 AC069544.1-201ENST00000609399 999 ntBASIC16.66■□□□□ 0.26
COPS3Q9UNS2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 AC068587.9-201ENST00000641814 219 ntBASIC16.66■□□□□ 0.26
COPS3Q9UNS2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.66■□□□□ 0.26
COPS3Q9UNS2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COPS3Q9UNS2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPS3Q9UNS2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
COPS3Q9UNS2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.64■□□□□ 0.26
COPS3Q9UNS2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
COPS3Q9UNS2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
COPS3Q9UNS2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
COPS3Q9UNS2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
COPS3Q9UNS2 AC067852.2-201ENST00000590513 2313 ntBASIC16.64■□□□□ 0.25
COPS3Q9UNS2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 KRT8P11-201ENST00000409686 1436 ntBASIC16.64■□□□□ 0.25
COPS3Q9UNS2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 AP003097.1-201ENST00000530657 1135 ntBASIC16.64■□□□□ 0.25
COPS3Q9UNS2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.64■□□□□ 0.25
COPS3Q9UNS2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms