Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 AC009947.2-201ENST00000444014 672 ntBASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 AP000550.4-202ENST00000639755 178 ntBASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA1Q9UND3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 AP000523.1-201ENST00000398242 1049 ntBASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 PCED1CP-201ENST00000419887 785 ntBASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 AL671277.2-201ENST00000458060 996 ntBASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPA1Q9UND3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 AC098818.2-201ENST00000564925 2320 ntBASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 AL121956.5-201ENST00000625261 221 ntBASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.21■□□□□ 0.35
NPIPA1Q9UND3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NPIPA1Q9UND3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms