Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HINT3Q9NQE9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
HINT3Q9NQE9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HINT3Q9NQE9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HINT3Q9NQE9 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HINT3Q9NQE9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.89■□□□□ 0.29
HINT3Q9NQE9 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HINT3Q9NQE9 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HINT3Q9NQE9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HINT3Q9NQE9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.89■□□□□ 0.29
HINT3Q9NQE9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
HINT3Q9NQE9 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.89■□□□□ 0.29
HINT3Q9NQE9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HINT3Q9NQE9 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.89■□□□□ 0.29
HINT3Q9NQE9 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HINT3Q9NQE9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.89■□□□□ 0.29
HINT3Q9NQE9 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HINT3Q9NQE9 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
HINT3Q9NQE9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.89■□□□□ 0.29
HINT3Q9NQE9 AC110285.5-201ENST00000611501 352 ntBASIC16.89■□□□□ 0.29
HINT3Q9NQE9 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HINT3Q9NQE9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.89■□□□□ 0.29
HINT3Q9NQE9 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HINT3Q9NQE9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HINT3Q9NQE9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HINT3Q9NQE9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HINT3Q9NQE9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HINT3Q9NQE9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HINT3Q9NQE9 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.89■□□□□ 0.29
HINT3Q9NQE9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HINT3Q9NQE9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 AC068587.9-201ENST00000641814 219 ntBASIC16.88■□□□□ 0.29
HINT3Q9NQE9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 AC138932.1-201ENST00000534164 6830 ntBASIC16.88■□□□□ 0.29
HINT3Q9NQE9 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HINT3Q9NQE9 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 AC004264.1-201ENST00000608354 794 ntBASIC16.87■□□□□ 0.29
HINT3Q9NQE9 AP000997.3-201ENST00000623333 2250 ntBASIC16.87■□□□□ 0.29
HINT3Q9NQE9 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.87■□□□□ 0.29
HINT3Q9NQE9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms